Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01460 ATGGTCTCTCCTAAAGAGGATGAAAAGCTTCTCATGTATATCACTAAGTACGGTCATGGATGTTGGAGCTCTGTTCCTAAGCAAGCAGGTTTGCAGAGGAGTGGTAAGAGTTGCAGTCTTAGGTGGATCAATTACTTAAGGCCTGATTTAAAGTTTGGAATATTTTTACTTTTACTATTTTCTCTACAACCACAGTTTAGGCAAGGGAGAATTAGGGCTCAACAGACCTTGAAAAAAGAACTATCACAACTCAAATCTGAAAATCTGAAGCTGACATATTACCCTATGGCACCGATTGGTACCTTCCACTCATGCTTCTCTACGAGGAATGTGACACCGAGGCAACCGTTACTTGTACCATTTGCTAGAGCCTGTTTGGTTTTTAATGCCACTCGTGTTTCGCCAGCATATCTTGAGtaa 420 0.4119 MVSPKEDEKLLMYITKYGHGCWSSVPKQAGLQRSGKSCSLRWINYLRPDLKFGIFLLLLFSLQPQFRQGRIRAQQTLKKELSQLKSENLKLTYYPMAPIGTFHSCFSTRNVTPRQPLLVPFARACLVFNATRVSPAYLE 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01460 139 SUPERFAMILY YaeB-like 92 136 IPR036413 -
Adu06g01460 139 ProSiteProfiles Myb-like domain profile. 1 46 IPR001005 -
Adu06g01460 139 CDD SANT 3 46 IPR001005 -
Adu06g01460 139 ProSiteProfiles TsaA-like domain profile. 96 139 IPR023370 -
Adu06g01460 139 Gene3D - 3 51 - -
Adu06g01460 139 SMART sant 3 48 IPR001005 -
Adu06g01460 139 Pfam Myb-like DNA-binding domain 3 46 IPR001005 -
Adu06g01460 139 PANTHER MYB DOMAIN PROTEIN 55 3 55 - -
Adu06g01460 139 SUPERFAMILY Homeodomain-like 3 55 IPR009057 -
Adu06g01460 139 PANTHER MYB DOMAIN PROTEIN 55 3 55 - -
Adu06g01460 139 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01460 Adu-Chr6 26241891 26244203 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01460 3 55 MYB Transcription Factor Family AT4G01680 88.679 2.04e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu06g01460 Myb_DNA-binding 1.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01460 K22900 - cit:102616969 112.079