Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu06g01458 | ATGAACATTTCACATGTTGCTGATTCTATTGGTTTGAAAGAGATGCCAAGATATGAAGTTAAAATTATTGAGGAGGATGACTGGATGAAAGGAGCTCATGTAGCCAAGGATACACAATTGATAGATTCCATTGCTGAAAAACAATCCCAGATATTTTCAGAAAAATGTGCTCATCCTATGGTTCATGGAGGGATGGGGGTTGCCACTAGTGCATACCCAATGACTGAATCAGTTCTCTCGAGTTCAATGCGGCATGGTGGGATGCTTGGGCATTATAGTGGAAGTTCTACTACTTCAGCTGATAAACCTAAAATAGGCCTGATATGCTTGCGGTGTCGACGGCGTGGTCACCGAGCTAAGAATTGCCCTGAAGTTCAAGTTGGTGCCAATTATGACAAGTATTGTTACAATTGTGGAGAAACTGGTCATTCACCTGCAAATTGTCCCCACCATGTTCAAGAAGGAGGGACAAAGTTTGCAGAGTGCTTTGTCTGTAAACAGCAAGGACACTTGAGTAAAAACTGCCCTCAAAATGCTCATGGCATCTATCCTAAGGGTGGTTGTTGTAAAATATGTGGTGGCGTGACACATTTGGCAAGGGATTGCCCCGAAAAAGGCTTGTATATTAGGATTTCTTCAATGAGACTGAGAAATGAACAGAGGCCTTGTGGAACGGTAACCAAATTTGTGAGTGGGGATGACATTGAGGATGACTTCATGATAGATGACATAAATAACAGAGACAAGGACAAGTCCTCAAAGTCCAAAGACGGTCAAGCAAAACCAAAAAAGGGTCCTAAAGTTGTGAACTTCAGCTAA | 819 | 0.4225 | MNISHVADSIGLKEMPRYEVKIIEEDDWMKGAHVAKDTQLIDSIAEKQSQIFSEKCAHPMVHGGMGVATSAYPMTESVLSSSMRHGGMLGHYSGSSTTSADKPKIGLICLRCRRRGHRAKNCPEVQVGANYDKYCYNCGETGHSPANCPHHVQEGGTKFAECFVCKQQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCPEKGLYIRISSMRLRNEQRPCGTVTKFVSGDDIEDDFMIDDINNRDKDKSSKSKDGQAKPKKGPKVVNFS | 272 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu06g01458 | 272 | MobiDBLite | consensus disorder prediction | 241 | 272 | - | - | |
Adu06g01458 | 272 | SUPERFAMILY | Retrovirus zinc finger-like domains | 155 | 205 | IPR036875 | GO:0003676|GO:0008270 | |
Adu06g01458 | 272 | Pfam | Zinc knuckle | 162 | 177 | IPR001878 | GO:0003676|GO:0008270 | |
Adu06g01458 | 272 | Pfam | Zinc knuckle | 134 | 150 | IPR001878 | GO:0003676|GO:0008270 | |
Adu06g01458 | 272 | Gene3D | - | 155 | 206 | - | - | |
Adu06g01458 | 272 | MobiDBLite | consensus disorder prediction | 242 | 263 | - | - | |
Adu06g01458 | 272 | SUPERFAMILY | Retrovirus zinc finger-like domains | 105 | 151 | IPR036875 | GO:0003676|GO:0008270 | |
Adu06g01458 | 272 | Pfam | Plant nuclear matrix protein 1 (NMP1) | 24 | 57 | IPR010604 | GO:0051011 | |
Adu06g01458 | 272 | Gene3D | - | 89 | 154 | - | - | |
Adu06g01458 | 272 | ProSiteProfiles | Zinc finger CCHC-type profile. | 162 | 177 | IPR001878 | GO:0003676|GO:0008270 | |
Adu06g01458 | 272 | ProSiteProfiles | Zinc finger CCHC-type profile. | 135 | 149 | IPR001878 | GO:0003676|GO:0008270 | |
Adu06g01458 | 272 | PANTHER | OS04G0555800 PROTEIN | 106 | 271 | - | - | |
Adu06g01458 | 272 | SMART | c2hcfinal6 | 161 | 177 | IPR001878 | GO:0003676|GO:0008270 | |
Adu06g01458 | 272 | SMART | c2hcfinal6 | 188 | 204 | IPR001878 | GO:0003676|GO:0008270 | |
Adu06g01458 | 272 | SMART | c2hcfinal6 | 108 | 124 | IPR001878 | GO:0003676|GO:0008270 | |
Adu06g01458 | 272 | SMART | c2hcfinal6 | 134 | 150 | IPR001878 | GO:0003676|GO:0008270 | |
Adu06g01458 | 272 | ProSiteProfiles | Zinc finger CCHC-type profile. | 109 | 124 | IPR001878 | GO:0003676|GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu06g01458 | Adu-Chr6 | 25893025 | 25895668 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu06g01458 | 107 | 205 | C2H2 Transcription Factor Family | AT5G20220 | 29.060 | 3.19e-07 | 49.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu06g01458 | - | K05765 | ahf:112805480 | 310.842 |