Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01455 ATGGCGACGAACAGATTCATCTGCGAGATATGCAACAAAGGATTCCAGAGGGATCAGAATCTTCAGCTGCACAGGAGGGGACACAACCTGCCATGGAAGCTGAGACAGAGGACGAACAAGGAGGTGAAGAAGAAGGTGTACATCTGCCCGGAGAAGAGCTGCGTCCACCACGAGCCGGCAAGGGCGCTGGGCGACCTGACAGGGATCAAGAAGCACTTCAGCAGAAAGCATGGCGAGAAAAAGTGGAAGTGCGAAAAATGTTCCAAGAAGTACGCTGTCCAATCTGATTGGAAAGCTCACTCCAAAACCTGCGGCACCAGAGAATATAAATGTGACTGTGGCACCCTCTTTTCCAGGAAGGATAGCTTTATTACTCACAGAGCATTTTGCGATGCATTGGCTGAGGAGAGTGCGAGGCTGAACTCGGTTTCTACGTCGACGAATCTGAGTTTCAAGAGCGAAGAGGCAACAACGCAGCAGGGAGTTCTGAATAATAATGTTGGGGGCGGAGTTGGATTTCGATTTGATTTCAATAATGAAATGGGAATGGTTGGTGCAGAACAAGAACAAATTATGAGGCCAAACTTGTCACTGTGGTTGAACCAACAACATGGAAACAACCGTCATCAGATTAATCAATTTGATATGCCATCATCATCAAGCTCTCATCATCAAGTTATGCACATGCCTATGCCTATGTTGCCTAATGATTTTGGAATGCTTGCTCCCAATTCATCAAAGGTATCGGAAGAAGGTGGGGGCTCAGATCATAATTCAGGTTTGGCATCTATGTATTCTGAGAATCAAAGCAAGCAATCATCAAAGGCACCTTCACCTTCAACTTATTCTCCGATGTCAGCCACTGCGCTTCTTCAGAAGGCAGCGCAAATTGGGTCCACCAACAACCCTTCAACTTTCAGTGCAAGTTTTGGGCTCATGACCTCTTCATCTTCCATTCAAACCACTACTGCTAGTAATTCAAACCAAAACCAACAGGGAAGAAGAATTGATCAGAGTATTAGGCAGCCAGATCAGTGTTTTAGCGCATTAATGCATTCGTCACAAAGTTTTGATGATCAGTTTTTGAGTAATCATCATCCTGGTTCATCAAGTGCTGCGGGGCATAACAATAATTTTACAAGAGACTTTCTTGGCATGAGTAGAGGACCATTCCTACCCCAAGAGCTAGCAAAGTTTGCTTCCGTAGGCTCATCAATGGGTTTGACCCAATTCACTACTAGCGCAACCCATCAATGA 1257 0.4543 MATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEVKKKVYICPEKSCVHHEPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARLNSVSTSTNLSFKSEEATTQQGVLNNNVGGGVGFRFDFNNEMGMVGAEQEQIMRPNLSLWLNQQHGNNRHQINQFDMPSSSSSHHQVMHMPMPMLPNDFGMLAPNSSKVSEEGGGSDHNSGLASMYSENQSKQSSKAPSPSTYSPMSATALLQKAAQIGSTNNPSTFSASFGLMTSSSSIQTTTASNSNQNQQGRRIDQSIRQPDQCFSALMHSSQSFDDQFLSNHHPGSSSAAGHNNNFTRDFLGMSRGPFLPQELAKFASVGSSMGLTQFTTSATHQ 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01455 418 SUPERFAMILY beta-beta-alpha zinc fingers 5 102 IPR036236 -
Adu06g01455 418 MobiDBLite consensus disorder prediction 259 285 - -
Adu06g01455 418 Pfam Zinc-finger double-stranded RNA-binding 6 28 IPR022755 -
Adu06g01455 418 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 405 - -
Adu06g01455 418 SMART c2h2final6 47 77 IPR013087 -
Adu06g01455 418 SMART c2h2final6 82 102 IPR013087 -
Adu06g01455 418 SMART c2h2final6 6 28 IPR013087 -
Adu06g01455 418 MobiDBLite consensus disorder prediction 234 285 - -
Adu06g01455 418 Gene3D Classic Zinc Finger 2 29 - -
Adu06g01455 418 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Adu06g01455 418 Gene3D Classic Zinc Finger 39 130 - -
Adu06g01455 418 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
Adu06g01455 418 PANTHER ZINC FINGER PROTEIN JACKDAW-LIKE ISOFORM X1 1 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01455 Adu-Chr6 25856233 25858643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01455 1 403 IDZ Gene Family AT5G03150 46.154 1.47e-108 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu06g01455 zf-C2H2_jaz 5.9e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01455 K25870 - gmx:100789331 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01455 06 25856233 25858643 Adu06g01455 06 25856233 25858643 ECH
Adu06g01455 06 25856233 25858643 Adu02g02850 02 94130441 94131829 PCT