Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01422 ATGTTGGATCTTAATCTCAACGCCGATTCCGCCTCCGGCATCCAAATGGAAAGTTCTGGAAGCTTCAATTCCTCCCTCGCCAATGCCGACACCGAGGACTCATGCTCCTACGGCGGGGCTGACGCCGTAGCATACAACTTCGCCATACTCAAGAACGCCGTCGGCGGGGACGGAGACGCTGGAGCTGCCGGAGACGACGGATGTGTACGGACAATCCAGCTTTTTCCGATGGTCGGAGCCGGCGATGGTGTTGCAGCTGAGCAGTTATGTGGCTCGTCATCAGTGTTGGAATTTGAGACGAAGGAGGATCGCGGCGGTGGTAGTGCGACGGCGGCGGAGCAGAGAATGGTTCCTCAGAGGGCGCAGCAGGTGAAGAAGAGTCGGCGTGGACCGAGGTCGCGAAGCTCGCAGTATCGCGGCGTCACGTTTTATCGAAGGACCGGACGATGGGAATCGCATATTTGGGACTGTGGGAAACAAGTGTACTTGGGTGGATTTGACACAGCACATGCTGCAGCTAGGGCATATGATCAAGCTGCGATCAAGTATGATTTAATAAGCTTGTGTTTGATAAGGGGAGTTACCCTGCACAAATGTGGTAGATGGGAAGCACGCATGGGGCAGTTTCTCGGAAAAAAATATATCTATCTTGGCCTATTCGATAGCGAACTAGAGGCTGCAAGGGCATATGATAGGGCTGCTATAAAGTGCAATGGAAGGGAAGCAGTTACTAACTTTGAGCCCAGCTCATATGAAGGAAAGGTAAATTCTCATGATGAGAATGAAGATAACAGGCAAAGTCTTGATCTTAATTTGGGCATAGCTCCCCCTTCTTTCTCTGAAGAACAAGTCAATAACATTCACAACAATGGGATTGGTTTCCAATATCAGCCTAGCTGGGATGACATCCCTATTGATAGGAGATTTATGTTTGAGCACTCTGCATCAAGATCACTGAATACTCAGCCACCTCATGGATTCTCCATACCATCTCAGCATCCTTCTGCTTGGGGCGGTACTGATTTCTTTCCCATCTACAAGGAAAGAGCAATAGAGAATATGATGGAAGCCAATCCCTTGCAAAATTGGGCATGGCAAGTCCAAGGTCATTGTGGCGGGGCAACTCCAATTCCACCTGTCTCTGCTGCAGCATCATCAGGATTCCCTTCAACATTAATGCCATCAGCTGCGGATAATCAAATTCATTTTCCAAACAAGACATTCCTCTACCCTAACTTCCCTCCATCGATTGCCAATTCCGGCACCATATCGCCCTTCTACTAA 1284 0.493 MLDLNLNADSASGIQMESSGSFNSSLANADTEDSCSYGGADAVAYNFAILKNAVGGDGDAGAAGDDGCVRTIQLFPMVGAGDGVAAEQLCGSSSVLEFETKEDRGGGSATAAEQRMVPQRAQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDQAAIKYDLISLCLIRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELEAARAYDRAAIKCNGREAVTNFEPSSYEGKVNSHDENEDNRQSLDLNLGIAPPSFSEEQVNNIHNNGIGFQYQPSWDDIPIDRRFMFEHSASRSLNTQPPHGFSIPSQHPSAWGGTDFFPIYKERAIENMMEANPLQNWAWQVQGHCGGATPIPPVSAAASSGFPSTLMPSAADNQIHFPNKTFLYPNFPPSIANSGTISPFY 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01422 427 Gene3D AP2/ERF domain 136 187 IPR036955 GO:0003700|GO:0006355
Adu06g01422 427 Gene3D AP2/ERF domain 192 248 IPR036955 GO:0003700|GO:0006355
Adu06g01422 427 MobiDBLite consensus disorder prediction 101 137 - -
Adu06g01422 427 CDD AP2 189 249 IPR001471 GO:0003700|GO:0006355
Adu06g01422 427 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 183 - -
Adu06g01422 427 SUPERFAMILY DNA-binding domain 191 248 IPR016177 GO:0003677
Adu06g01422 427 Pfam AP2 domain 137 183 IPR001471 GO:0003700|GO:0006355
Adu06g01422 427 Pfam AP2 domain 189 239 IPR001471 GO:0003700|GO:0006355
Adu06g01422 427 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 192 422 - -
Adu06g01422 427 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 183 - -
Adu06g01422 427 ProSiteProfiles AP2/ERF domain profile. 137 247 IPR001471 GO:0003700|GO:0006355
Adu06g01422 427 SUPERFAMILY DNA-binding domain 136 183 IPR016177 GO:0003677
Adu06g01422 427 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 192 422 - -
Adu06g01422 427 SMART rav1_2 137 185 IPR001471 GO:0003700|GO:0006355
Adu06g01422 427 SMART rav1_2 190 253 IPR001471 GO:0003700|GO:0006355
Adu06g01422 427 PRINTS Ethylene responsive element binding protein signature 229 249 IPR001471 GO:0003700|GO:0006355
Adu06g01422 427 PRINTS Ethylene responsive element binding protein signature 191 202 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01422 Adu-Chr6 22863565 22866287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01422 71 292 AP2-EREBP Transcription Factor Family AT4G36920 49.296 3.44e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Adu06g01422 AP2 3.9e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01422 K09284 - gmx:100797238 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01422 06 22863565 22866287 Adu06g01422 06 22863565 22866287 ECH