Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01417 ATGGAGGAGAACGGAGCGCTCTTCCTCTTCTCTCTCTCACTTCTACTTCTCCCGCTTTCCTCCTCTTCCGCTCAGATGCAAGGTTTTGTAAGTTTGGACTGTGGAGGTTCAGAAAATTTCACTGATGAGATTGGTCTTAAATGGAGCCCTGATGATAAGCTTCCTTATGGAGAAGTAAGCACCATATCAGTTGCAAACGAGACGCGGCGGCAGTACACCACGCTTAGACACTTCCCTGCTGATACCAAGAAATACTGCTACACACTTGATGTTGTGAGCAGGACAAGGTACCTACTGAGGGCCGCATTCCTGTATGGGAACTTTGATAATAACAATGTTTATCCTAAATTTGACATTTCTATTGGGGCTACACATTGGTCTACTATTGTTATATCAGATGCTAACCTTATAGAAATGAGAGAGCTTATATTTTTGGCTTCAAGTTCTGCTGTGAGTGTGTGTTTATCGAACGCCACAACAGGGCAGCCGTTCATATCTACACTTGAGCTCCGGCAATTCAATGGTTCCGTTTATTATACACAATATGAGGAACAATTTTACCTCAGTGTCTCTGCACGGATAAATTTTGGAGCAGAAACTGATGCTCCAATCAGGTATCCTGATGATCCTTTTGATAGAATATGGGAGTCGGATTCTGTGAAGAAAGCAAATTTTCTTGTTGATGTTGCTGATGGTACCAAGAAAATCTCAACCGAAGTACCAATTGATGTTAACAGAGACGAAATACCCCCAGTGAAAGTGATGCAGACAGCAGTAGTAGGCACAAATGGGTCTCTAACTTACCGGTTGAACTTGGATGGTTTTCCTGGTACTGGTTGGGCATTCTCTTATTGTGCAGAAATTGAAGATTTAGGTCCAAATGATTCCAGAAAATTTAGGCTAGTACTTCCAGGCCAGCCTGATATTAGCAAGGCTGTTGTAAATATTGAAGAAAATGCTCAGGGAAAGTATCGCCTCTATGAACCAGGATTTAACAACATATCCCTGCCCTTTGTGCTTTCTTTTAGATTTGGCAAGACCTCTGATTCTTCCAAGGGTCCTCTTCTAAATGCAATGGAGATAAATAAATATTTGGAGAAAAATGATGGCTCTATTGATTTAGCAGCTGTTTCTAGTGTATTGTCACACTACCCTTCGGCAGATTGGGCACAAGAGGGAGGGGACCCTTGTCTACCTGTTCCATGGTCATGGATCCGCTGTAATTCAGATCCTCAACCAAAAGTAGTTTCAGTCTTATTGTCCGGTAAAAACCTGACTGGAAATATTCCTTTGGATATCACCAAACTGACTGGTCTAGTTGAACTATGGCTTGATGGAAACATGTTAACTGGCCCAATACCAGATTTTACTGGGTGCATGGACTTAAAGATCATGTATGTGCAAAATAATTTGTTATCTGGAACAATACCATCTGCTCTTCTGAGCAAAGATTTGGTTTTAGACTACTCTGGAAACATTAATCTTCACAGGGGGAAAAGAATAGAGGGCAAAACGTATGTTATTATCGGTTCCACAGTGGGGGCTTCTGTTCTACTATTGGCCACTATTATATCTTACTTGTTTATGCGTAAAGGAAATAGAAGGTATTTTGAGCAAGATCACAACTCTTCTCTCCCTACTCAAAAGCTGGCTTCCTGGAAAAATGATGATGCTGCAGAAACTGCTCACTGCTTCAGTTTTTCCGAAATTTTAAATGCCACAAATAATTTTGAGAAAAAGATTGGTTCTGGTGGTTTTGGAGTTGTGTACTACGGGAAACTGAAAGATGGAAAAGAGATAGCTGTAAAAGTTTTGACCAATAATTCCTATCAAGGCAAGCGAGAGTTCTCCAATGAGGTGACACTTCTTTCAAGAATACATCACAGAAATTTGGTACAGCTTCTTGGGTATTGCCGGGAGGAAGATAGTAGCATGCTCGTTTATGAATTCATGCACAATGGAACTCTCAAGGAACATCTCTATGGTCCATTAACGCATGGACGGAGTATCAATTGGATTAAGCGGCTTGAGGTTGCAGAAGATGCTGCAAAAGGGATTGAATACCTTCATACGGGTTGTATTCCTGTCGTTATCCATAGAGATGTAAAAAGCAGCAATATTCTTCTTGACAAGCAAATGAGAGCTAAGGTCTCAGATTTTGGTCTTTCAAAACTTGCTGTTGATGGAGTTTCCCATGTTTCTAGCATAGTTCGGGGGACAGTAGGATATCTTGATCCTGAGTACTATATCTCCCAGCAGCTGACTGACAAGAGCGATGTTTATAGTTTTGGTGTAATTCTTCTTGAACTCATATCTGGACAAGAAGCAATATCAAATGAAAACTTTGGTGTTAACTGCCGAAACATAGTCCAGTGGGCAAAATTTCACATTGAGAGTGGTGACATACAAGGAATTATTGACCCCATGCTAAGGAATGATTACGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCTCATGGATATATGAGGCCATCGATTTCTGAAGTTCTGAAGGAGATCCAAGATGCAATAGCTATTGAGAGAGAGGCTGAAAGCAATTCACGTGGCTTGTCAAGAAATTCTTTCCACTCTTCCGTGAACATAGGTTCAATGGATCTAGGGCCTCAAGCCAGACAGAATCGTATTCCTCCTTCTGGAGTAAGCGTCCGATTCCTCTCCCATTTCTCACCGGATCTCTCTCCCGCCAAATACAAAAATTCCATAAACATTTCCCAGCACCCAAACCAGATTAGGGTTCCGGCGATCATGGCCGACGGTCCGGCGAGCCCAGGCGGCGGAAGCCACGAGAGCGGTGACCATAGCCCTCGCTCCAACATAAGGGAGCAGGACAGGTTCCTTCCCATCGCTAACATCAGCCGCATCATGAAGAAGGCGCTTCCCGCCAACGGAAAAATCGCCAAGGATGCCAAAGAAACTGTTCAGGAATGCGTCTCCGAGTTTATCAGCTTCATCACCAGCGAGGCCTCTGATAAGTGCCAGAGAGAGAAGAGGAAGACTATTAACGGTGATGATTTGCTCTGGGCAATGGCGACTCTCGGTTTCGAGGATTATATTGATCCCTTGAAGATTTACCTCACAAGATACAGAGAGGGTGACACCAAGGGTTCAGCAAAGGGTGGAGACGCTTCTGCTAAAAAAGATGTTCAACCAAGTCCTAATGTTCAGCTTGCTCATCAAGGTTCTTTCTCACAAGGCGTTAATTACACTAACTCTCAGGGTCAACATATGATGGTTCCTATGCAAGGTCCAGAGTAG 3297 0.428 MEENGALFLFSLSLLLLPLSSSSAQMQGFVSLDCGGSENFTDEIGLKWSPDDKLPYGEVSTISVANETRRQYTTLRHFPADTKKYCYTLDVVSRTRYLLRAAFLYGNFDNNNVYPKFDISIGATHWSTIVISDANLIEMRELIFLASSSAVSVCLSNATTGQPFISTLELRQFNGSVYYTQYEEQFYLSVSARINFGAETDAPIRYPDDPFDRIWESDSVKKANFLVDVADGTKKISTEVPIDVNRDEIPPVKVMQTAVVGTNGSLTYRLNLDGFPGTGWAFSYCAEIEDLGPNDSRKFRLVLPGQPDISKAVVNIEENAQGKYRLYEPGFNNISLPFVLSFRFGKTSDSSKGPLLNAMEINKYLEKNDGSIDLAAVSSVLSHYPSADWAQEGGDPCLPVPWSWIRCNSDPQPKVVSVLLSGKNLTGNIPLDITKLTGLVELWLDGNMLTGPIPDFTGCMDLKIMYVQNNLLSGTIPSALLSKDLVLDYSGNINLHRGKRIEGKTYVIIGSTVGASVLLLATIISYLFMRKGNRRYFEQDHNSSLPTQKLASWKNDDAAETAHCFSFSEILNATNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTNNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEDSSMLVYEFMHNGTLKEHLYGPLTHGRSINWIKRLEVAEDAAKGIEYLHTGCIPVVIHRDVKSSNILLDKQMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNENFGVNCRNIVQWAKFHIESGDIQGIIDPMLRNDYDLQSMWKIAEKALMCVQPHGYMRPSISEVLKEIQDAIAIEREAESNSRGLSRNSFHSSVNIGSMDLGPQARQNRIPPSGVSVRFLSHFSPDLSPAKYKNSINISQHPNQIRVPAIMADGPASPGGGSHESGDHSPRSNIREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREGDTKGSAKGGDASAKKDVQPSPNVQLAHQGSFSQGVNYTNSQGQHMMVPMQGPE 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01417 1098 ProSitePatterns Protein kinases ATP-binding region signature. 581 603 IPR017441 GO:0005524
Adu06g01417 1098 SUPERFAMILY Protein kinase-like (PK-like) 561 850 IPR011009 -
Adu06g01417 1098 PRINTS CCAAT-binding transcription factor subunit A signature 1025 1043 - -
Adu06g01417 1098 PRINTS CCAAT-binding transcription factor subunit A signature 987 1005 - -
Adu06g01417 1098 PRINTS CCAAT-binding transcription factor subunit A signature 1006 1024 - -
Adu06g01417 1098 PANTHER OS07G0107800 PROTEIN-RELATED 13 879 - -
Adu06g01417 1098 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 959 1023 IPR003958 -
Adu06g01417 1098 Pfam Protein tyrosine and serine/threonine kinase 577 777 IPR001245 GO:0004672|GO:0006468
Adu06g01417 1098 CDD STKc_IRAK 581 848 - -
Adu06g01417 1098 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Adu06g01417 1098 ProSiteProfiles Protein kinase domain profile. 575 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g01417 1098 MobiDBLite consensus disorder prediction 1046 1070 - -
Adu06g01417 1098 SUPERFAMILY L domain-like 414 492 - -
Adu06g01417 1098 Gene3D Histone, subunit A 946 1079 IPR009072 GO:0046982
Adu06g01417 1098 SUPERFAMILY Histone-fold 956 1055 IPR009072 GO:0046982
Adu06g01417 1098 SMART serkin_6 575 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g01417 1098 PANTHER TYROSINE KINASE DOMAIN PROTEIN 13 879 - -
Adu06g01417 1098 Pfam Malectin-like domain 32 362 IPR024788 -
Adu06g01417 1098 Gene3D Ribonuclease Inhibitor 374 496 IPR032675 -
Adu06g01417 1098 MobiDBLite consensus disorder prediction 929 954 - -
Adu06g01417 1098 Gene3D Transferase(Phosphotransferase) domain 1 651 871 - -
Adu06g01417 1098 Gene3D Phosphorylase Kinase; domain 1 549 650 - -
Adu06g01417 1098 ProSitePatterns NF-YB/HAP3 subunit signature. 990 1006 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01417 Adu-Chr6 22518976 22529910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01417 19 685 Receptor kinase-like Gene Family AT2G37050 65.136 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Adu06g01417 Malectin_like 6.7e-74 CL0202
TF NF-YB Adu06g01417 Malectin_like 6.7e-74 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01417 - - aprc:113861809 1528.84