Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01416 ATGCACATAATAGGGGAAGAGTCGCAGCCGCAGCAGAGGTGTGGATATGGAAACTCCTCCACCGATCCATTTGGTTTACTTTATATACTCGATGTTTATTTCCCTCAGCAACTGTTCACTGTCCAAGATTCGTGGCTCAACCTCACTTCTGCTCTTCTCTCCTACTTCTCTTCTTCCTCCGGCCAAAGCCTGGCTTCTCAGGTGAAAAATGATTATGGAAACTTTGTCCTGTCAGTAGACTTTCAGCAACTCAAACAAATATGCCATGTTGAGGAATTTTATGCAATGTTGGGGGAGAAACCTAAAATTGCTCTCTTATGCATGAGTGCCGCACTTCACAAGGTTTTGCTTTCCAACTTGGAGAATGACAAGCCGGAGCTTGATGCAAAAGTAGATATCCGTCTTCATAACTGCCCTGAAACTATGATTGCTCTAAAGAACTTAAAAGCAGCTTTCATTGACAAGCTTGTCTCAGTTCGTGGTACTGCTGTGAAAGTCAGCACTGTCAGGCCTCTTGTAGTAGAGCTGACTTTCAAATGTAGTAAATGTAAACAAAGTATTACGCGTATATTTCCAGACGGCAAATTTTCACCTCCATCAACTTGTAATTTGCATGGTTGTAAGAGCAAAATCTTTATTCCATTTCGATCTACTGCTCAAACTATTGATTTTCAAAAAATAAGAGTTCAAGAGATATTAAAACCTGAAGATCATGAAGAAGGGCGAGTGCCTCGAACAGTGGAATGTGAGCTTACTCAAGATCTTGTAGATGCATGCATACCTGGTGATGTGGTGACTGTTACCGGAATTATAAGAGGAATTAACACTTATATGGATATTGGAGGAGGGAAGTCAAAGAACAGAAGCCAGGGGTTTTACTACTTATATCTGGAAGCTGTATCTGTAAAAAATTCGAAGTCACAGTCCACTCCTGGAGATTCGCAAGAAGCTAATCCCAAAGCTAGACCATCCGAGCTGTTGGATCTGTTTTCATTTTCTTCAAGGGATTTAGAATTTGTAGTGAAGTTTGTGGAGGAACATGGTTCAGATTTGTTTCGTCAAATCCTTCAATCTATATGCCCATCCATCTATGGCCATGAGCTTGTTAAAGCCGGGATAACTGTTGCATTATTTGGTGGTGTGCGAAAGCATTCTATGGATCCAAATAAGGTTCCTGTGAGGGGGGACATTCATGTTATAATTGTTGGTGATCCTGGTCTTGGTAAAAGCCAATTGCTACAAGCAGCAGCAGCAGTTTCTCCACGTGGCATTTATGTATGTGGGAATGCCACAACCCCCCCCCCCTCTCTCTCTTCCCTCCCCCTTCTCTTATCTTCTTTCTTCTCTCTTTTCATTTTTATGGATTTTCTTGATGAAACTGTGATCTTATGGGCTCCATGTGCCATGGTTCTGGCTGATAGTGGATTGTGCTGTATTGATGAATTTGATAAAATGTCATCAGAACATCAGGCTTTACTAGAGGCAATGGAGCAACAATGTGTTTCCATTGCAAAGGCTGGTCTAGTAGCAAGTTTATCATCCCGAACTTCTGTCCTGGCAGCTGCAAACCCCGTTGGTGGTCATTATAACCGGGCGAAAACTGTTAATGAAAATTTGAAAATGAGTGCTGCTCTCCTGTCACGTTTTGATTTGATTTTCATACTGTTAGACAAACCTGATGAGCTTCTAGACAAGCGACTCTCCGAGCACATTATGTCCCTACATGCTGGGACTGGACAACATTCACTGGCATTGAAAAAGCGACGTGGAGATCCGCTCCCTGAGTCCAGAACTGTTGTATCGCAGAATGGTGAAAGTGGTGTAAATTTGGGTGTTAGATCTGGTTCTTTGGTTTCAAGGCTGAGACTTGATCCACAAAGAGACAGAGATTTTGTTCCATTGCCCAGTCAACTTCTTCGTAAATACATTGCCTATGCAAGGAGTTTTGTATTTCCTAGGATGTCCAAGCCAGCAGCAGATATCTTGCAAAAGTTTTACCTTAAACTTAGAGATCATAATACTTCGGCTGATGGCACTCCTATAACAGCAAGGCAACTGGAAAGTCTGGTAAGGTTGGCTGAAGCTCGAGCTCGGGTGGAATTGAGGGAAGAAATAACAGCCCAAGATGCACTGGATGTTGTGGAAATTATGAAGGAATCTCTGTATGATAAATATGTTGATGAGCATGGTATTGTTGATTTCGGTCGAAGTGGGGGAATGAGTCAACAAAAGGAGGCAAAACGCTTTCTAAATGCTCTCAATAAGCAATCTGAACTAGAACAAAAAGATTGTTTTTCAATATCAGAAATATATAACCTTGCAGATAGGATTTCCTTGAAAGTTCCAGATATTGACACTTTCATTGATAATTTAAACAGTGTTGGTTATCTTCTCAAAAAAGGACCAAAAACATACCAGGTGCTATCCTCTTCGTATAGTCGAAGCCAATCATTTAGGACTAGGGGCTAA 2469 0.4151 MHIIGEESQPQQRCGYGNSSTDPFGLLYILDVYFPQQLFTVQDSWLNLTSALLSYFSSSSGQSLASQVKNDYGNFVLSVDFQQLKQICHVEEFYAMLGEKPKIALLCMSAALHKVLLSNLENDKPELDAKVDIRLHNCPETMIALKNLKAAFIDKLVSVRGTAVKVSTVRPLVVELTFKCSKCKQSITRIFPDGKFSPPSTCNLHGCKSKIFIPFRSTAQTIDFQKIRVQEILKPEDHEEGRVPRTVECELTQDLVDACIPGDVVTVTGIIRGINTYMDIGGGKSKNRSQGFYYLYLEAVSVKNSKSQSTPGDSQEANPKARPSELLDLFSFSSRDLEFVVKFVEEHGSDLFRQILQSICPSIYGHELVKAGITVALFGGVRKHSMDPNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTPPPSLSSLPLLLSSFFSLFIFMDFLDETVILWAPCAMVLADSGLCCIDEFDKMSSEHQALLEAMEQQCVSIAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELLDKRLSEHIMSLHAGTGQHSLALKKRRGDPLPESRTVVSQNGESGVNLGVRSGSLVSRLRLDPQRDRDFVPLPSQLLRKYIAYARSFVFPRMSKPAADILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARVELREEITAQDALDVVEIMKESLYDKYVDEHGIVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFSISEIYNLADRISLKVPDIDTFIDNLNSVGYLLKKGPKTYQVLSSSYSRSQSFRTRG 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01416 822 PANTHER DNA HELICASE MCM8 23 817 - -
Adu06g01416 822 CDD MCM8 355 720 - -
Adu06g01416 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 727 IPR027417 -
Adu06g01416 822 SMART mcm 141 722 IPR031327 GO:0003677|GO:0005524|GO:0032508
Adu06g01416 822 Gene3D - 145 274 IPR012340 -
Adu06g01416 822 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 23 817 IPR031327 GO:0003677|GO:0005524|GO:0032508
Adu06g01416 822 SMART AAA_5 395 560 IPR003593 -
Adu06g01416 822 Pfam MCM OB domain 145 273 IPR033762 -
Adu06g01416 822 Pfam MCM P-loop domain 466 575 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu06g01416 822 Pfam MCM P-loop domain 349 432 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu06g01416 822 Pfam MCM AAA-lid domain 638 721 IPR041562 -
Adu06g01416 822 ProSiteProfiles MCM family domain profile. 351 571 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu06g01416 822 Gene3D - 172 222 - -
Adu06g01416 822 Gene3D - 328 727 IPR027417 -
Adu06g01416 822 SUPERFAMILY Nucleic acid-binding proteins 71 275 IPR012340 -
Adu06g01416 822 Coils Coil 479 499 - -
Adu06g01416 822 PRINTS Mini-chromosome maintenance (MCM) protein family signature 394 409 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu06g01416 822 PRINTS Mini-chromosome maintenance (MCM) protein family signature 467 481 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu06g01416 822 PRINTS Mini-chromosome maintenance (MCM) protein family signature 494 507 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu06g01416 822 PRINTS Mini-chromosome maintenance (MCM) protein family signature 518 530 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu06g01416 822 PRINTS Mini-chromosome maintenance (MCM) protein family signature 545 553 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01416 Adu-Chr6 22440679 22447058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01416 18 808 Core DNA Replication Machinery Family AT3G09660 67.591 0.0 1086
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01416 K10737 - gmx:100784549 1264.98