Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01414 ATGGGGAAGACGCGTGGAATGGGAGCTGCCCGTAAGCTGAAGTCCCACCGCAGAAGGCAACGGTGGGCAGACAAATCATACAAGAAATCTCATCTTGGTAATGAATGGAAGAAACCTTTTGCTGGTTCTTCCCATGCCAAGGGTATTGTTCTTGAAAAGATAGGTATTGAGGCTAAGCAGCCCAATTCTGCCATTCGTAAATGTGCGAGGGTTCAACTCATCAAGAATGGGAAGAAGATTGCTGCATTTGTACCAAATGATGGTTGCTTAAACTACATTGAAGAGAATGACGAAGTTTTGATAGCTGGATTCGGAAGAAAAGGTCATGCCGTTGGTGATATTCCCGGTGTTAGGTTCAAGGTTGTGAAGGTCTCTGGTGTGTCACTCCTTGCTCTTTTCAAGGAGAAGAAGGAGAAGCCAAGATTGAGTGGAACGTATCATTATTGTTGGGGTCTTTATCTAAAGTTGGCGAAGAATAATTTCCTGCAGTTGTATTACTGCTTATATGTTCGTAAAAATGATATTTGA 528 0.428 MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRLSGTYHYCWGLYLKLAKNNFLQLYYCLYVRKNDI 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01414 175 Pfam Ribosomal protein S12/S23 31 141 IPR006032 GO:0003735|GO:0005840|GO:0006412
Adu06g01414 175 SUPERFAMILY Nucleic acid-binding proteins 20 145 IPR012340 -
Adu06g01414 175 TIGRFAM uS12_E_A: ribosomal protein uS12 6 141 IPR005680 GO:0003735|GO:0006412|GO:0015935
Adu06g01414 175 PANTHER BNACNNG03140D PROTEIN 1 141 - -
Adu06g01414 175 Gene3D - 25 142 IPR012340 -
Adu06g01414 175 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 1 141 IPR006032 GO:0003735|GO:0005840|GO:0006412
Adu06g01414 175 CDD Ribosomal_S23 26 139 IPR005680 GO:0003735|GO:0006412|GO:0015935
Adu06g01414 175 MobiDBLite consensus disorder prediction 9 25 - -
Adu06g01414 175 MobiDBLite consensus disorder prediction 1 28 - -
Adu06g01414 175 ProSitePatterns Ribosomal protein S12 signature. 59 66 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01414 Adu-Chr6 22329177 22331175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01414 1 141 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 95.745 5.37e-95 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01414 K02973 - fve:101294077 285.419