Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01402 ATGATGATGCCCCACATCAATATTAGGAGGATCACAAGATTTTGGTTGATACCAACGGTACAAGATGAAGATTTATTATGTCCTGGTAATGGACTTGGTGCAGCATTTTCAACATTAATTGCAACTTTCAAAGCATTCCAACAGAAACCACCTGAACTCAAGAACCTCCGACGCAGTAAGCAAACCCTAGCCTCCCGCAGAACTTGTCGTCGTCAGCGGGAGTGGTCAACTACACCCGCCGTTCGTCGCACCCAAGGAATTCCGCTGTGGTGCTCTTATGCCTATCCCTGTATCTCCGTGCCTGTACTTGTCGATTCTGCCTGCAAGTGTCACCCGAGTGTCGTCGCAGTTATTGGGTTCTCGTGTTTCGGCTTTCTTGTCGCCGCTGGCAGAAGGAAGTCGCGGAAAATCCTGATTGCTTGCGTTTGGAGGGGAGGTCGCGGCGTCGCAGTCGCCCGTTGGCATGCTTTAAGAATTTGGCACTGTGTGGTGAATATTTTGATGGACGTTCCCGAGGCTGTTGACATTAATGCAATGTGTGAGGAGGGGGCAGGCGTGATGGGCACAGTCGATTTTGGAGATGTAGCCGATATAACGGAAAATGATATTTTGAGGAAGGTGTTTCGTAGCGAAGACGATGCATACGAGTTTTATAAGAGATTAGGAAAATTCTACGGGTTTGGTATAAGAAGGGGAGACATGTTCAAGGATGAGAAGGGTAATTTGGTTCGGAGAAGATTTTTTTGCAATAGAGAGGGACAGAGAGATAAGAAACATTATAACAGGATCGACAGGAAGAGGCCTCACAAGCCGGAGACAAGGACGAATTGTGAAGCAAGAATGTGTATATATTTAGATAAGGACAGCTCGTTGTGGAGGGTCAAGAAAATCATTTTGAACCACAATCACAACATGACTCATCCTGGAATGGTCCATCTAATTACAAGTTTTCGTTCGTTGACGGATGCTGCGAAAGCCCAATTAGATGGGTTTCAAGGTTGTGGCATCTCCACGGCAAAGACAATGCGGTACATGGCTGGGGTATCTGGAGGGTATTCATTGGTAGAGTGGGCTCAGGCCGCAGCCGATTATGGCTTGCAGGATTCACTATGGTGGAACCAAGTCTATGGGAAAAAGGAGATGTGGGCAAACGCTTTCTTGTGCGAGAAATTCTGTGCCGGGTATCGGACAACATCACGGTGCGAAGGGATAAATTCGGTGTGCAAGAATTTTCTTGAATCAAAACACAGTATGTTGGAGCTTGTTCAGAATCTAGAACTTCTTGTGCGAGAGTATAGGAACAATGAGTTGTTGGCACAGTTCAGGTCTATTTATAGTGAACCAGTGCTGACAACCTCGCTGGAATCCCTTGAGCGTCATGCAGCTTCTGTTTACACGAGAGCGGTATTTGTAGATGCTAAACGGGAGATTCAGAGTGTATCTTCAGTTAATTTTGTTGGGGTGAGGCGGTCATTGACCACAAAGGTGTACACAGTTGAGGAGTACGGTCATCCAGGCCGTCATATTATAGTATTATGTGATAAGAACATGGGTAAATTAGAATGTGGTTGTAATTTTTGGAGAATTCAGGGGTTTCCATGCAAACATATGTTTTTTGTCATGAAGCATGAACACTTGTTGACAATACCTAGTAGTCTAGTGTTGAAGCGTTGGACCAAAGAAGCAAAATCATTAGGCGCATACGCTGAGAAAACAGATGACGGGGGTGATAGAGGGTTCTTGCTTCGCCATGGAGCACTTCATTCGGCGTCCAGATGGTTGTTCTTTTTAGGGGCCCAGAAGGTTGGGTTATTCGGTGTTGCTTTGGAGGGGATTCGCCGACTATGTGCAACATTGGAATCAGAGTTGGCCAATGGTGTTCATCCTACCAAGTCTAAGCAACGCGGTGAAATTCGAGATCCAGTTGTTGTGCGAACAAAGGGAGCACCAAGGGGTCATAAGAGAAAGGCGTCCAAGAGAAAGTGTGCGAACTGCAACAAGCCGGGACATACAAAGAGGACTTGCACAGATGGAAGGCCTTGTCGGGGAAAAAAACCCCGAGTGGATACATTCAATTCTGCTGAGGACGGGGGACAAAGTGAGGAGGTGGCTGAACTGGAAGCGACCGGATCCAATGATCAAACTATTGGGATACCGTGGGCAGTAGTCATTCGGAATGAGCGACGATATTGGTCAAAATCACCAGGTTCAGAAACTACTCCACAACTTCTCTAA 2235 0.4649 MMMPHINIRRITRFWLIPTVQDEDLLCPGNGLGAAFSTLIATFKAFQQKPPELKNLRRSKQTLASRRTCRRQREWSTTPAVRRTQGIPLWCSYAYPCISVPVLVDSACKCHPSVVAVIGFSCFGFLVAAGRRKSRKILIACVWRGGRGVAVARWHALRIWHCVVNILMDVPEAVDINAMCEEGAGVMGTVDFGDVADITENDILRKVFRSEDDAYEFYKRLGKFYGFGIRRGDMFKDEKGNLVRRRFFCNREGQRDKKHYNRIDRKRPHKPETRTNCEARMCIYLDKDSSLWRVKKIILNHNHNMTHPGMVHLITSFRSLTDAAKAQLDGFQGCGISTAKTMRYMAGVSGGYSLVEWAQAAADYGLQDSLWWNQVYGKKEMWANAFLCEKFCAGYRTTSRCEGINSVCKNFLESKHSMLELVQNLELLVREYRNNELLAQFRSIYSEPVLTTSLESLERHAASVYTRAVFVDAKREIQSVSSVNFVGVRRSLTTKVYTVEEYGHPGRHIIVLCDKNMGKLECGCNFWRIQGFPCKHMFFVMKHEHLLTIPSSLVLKRWTKEAKSLGAYAEKTDDGGDRGFLLRHGALHSASRWLFFLGAQKVGLFGVALEGIRRLCATLESELANGVHPTKSKQRGEIRDPVVVRTKGAPRGHKRKASKRKCANCNKPGHTKRTCTDGRPCRGKKPRVDTFNSAEDGGQSEEVAELEATGSNDQTIGIPWAVVIRNERRYWSKSPGSETTPQLL 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01402 744 MobiDBLite consensus disorder prediction 648 667 - -
Adu06g01402 744 MobiDBLite consensus disorder prediction 672 691 - -
Adu06g01402 744 Pfam FAR1 DNA-binding domain 216 305 IPR004330 -
Adu06g01402 744 Coils Coil 415 435 - -
Adu06g01402 744 SMART 26again6 520 547 IPR006564 GO:0008270
Adu06g01402 744 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 206 341 IPR031052 GO:0006355
Adu06g01402 744 PANTHER OS03G0181600 PROTEIN 206 341 - -
Adu06g01402 744 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 354 565 IPR031052 GO:0006355
Adu06g01402 744 PANTHER OS03G0181600 PROTEIN 354 565 - -
Adu06g01402 744 MobiDBLite consensus disorder prediction 647 711 - -
Adu06g01402 744 ProSiteProfiles Zinc finger CCHC-type profile. 660 677 IPR001878 GO:0003676|GO:0008270
Adu06g01402 744 ProSiteProfiles Zinc finger SWIM-type profile. 507 545 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01402 Adu-Chr6 21626136 21631706 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g01402 FAR1 2.5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01402 - - adu:107493380 749.199