Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01393 ATGGGTGATGCAATTGCAAACAAACAAAGAAGAAATTCAGAGAGGGATAGAAAACAAAGAAACCCACCTCTGATTCCGCGTGAGGGAGGAGAAGTAGCCACGGATTTCGTAGGTAGAAGTGTAGAACGCAGATCCTTTCACAGTTCACCGTTTCAACGCAAATCCTTTCACAGTTTCACCCTTTCAACGCGTTCTCTGGTCAGGGTCTCAGGGAGGAGAAGATTAGATTTAGGGCTGGGAGGGCTTATAGGGCCAGCCCTCCACTGCCGCCGTCGCATATGCTCGAAGCGGACGTCCCCACTGCGCTCGTCTCTGCCACTGCTTGAAGCTGTCATCCCCACTGCAACTTGTCTCGCGTCGTTCCTCCGTCGCGTAGCCACTGTTTCACTGCGTCAGCTCTGTTCCACCAGGCTCCATCCCTTCTTTGCTCCAGTTCTGTTGTGTCAAGCCCTTCGTGCTCCCTCACCGCTGTACTCTAGAAGCTTTCTGTGGAATTTTACCAAAAAGTTTGTCACATTTGGGATCATTACTGTTATTGTGTCTGATCGTTATGTAACAGTGGTTCCAGTTCGGGGTGGCTCTATGTCTCCCACACTTAATCCAAATACCAGCTCTTTTGCAGGAAACTTCTCTGATGATTATGTCTTGGTTGAGAAGTTTTGCATTGACAAATACAAATTTTCACATGGAGATGTTGTGGTCTTCAGTTCCCCATTGAATCACAAGGAGAGACACATAAAGAGAATAGTTGCATTATCTGGTGAATGGTTTAGTAGTCGTCAGAACTATGATGTGTTGAAGGTTCCAGAAGGACATTGTTGGGTTGAGGGAGATAATGCGGCTTTTAGCATGGATTCAAAACAATTTGGATCTATTCCTTTGGGCCTCATACGAGGAAGGGTGACCCATGTTGTGTGGCCTCCACAAAGAATAGGCGCCATCCAGAGTCCTCCACGAGAAGGATTATCTTCTTTATAG 978 0.4703 MGDAIANKQRRNSERDRKQRNPPLIPREGGEVATDFVGRSVERRSFHSSPFQRKSFHSFTLSTRSLVRVSGRRRLDLGLGGLIGPALHCRRRICSKRTSPLRSSLPLLEAVIPTATCLASFLRRVATVSLRQLCSTRLHPFFAPVLLCQALRAPSPLYSRSFLWNFTKKFVTFGIITVIVSDRYVTVVPVRGGSMSPTLNPNTSSFAGNFSDDYVLVEKFCIDKYKFSHGDVVVFSSPLNHKERHIKRIVALSGEWFSSRQNYDVLKVPEGHCWVEGDNAAFSMDSKQFGSIPLGLIRGRVTHVVWPPQRIGAIQSPPREGLSSL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01393 325 Pfam Signal peptidase, peptidase S26 164 255 IPR019533 GO:0004252|GO:0006465
Adu06g01393 325 Pfam Signal peptidase, peptidase S26 262 306 IPR019533 GO:0004252|GO:0006465
Adu06g01393 325 PRINTS Bacterial leader peptidase 1 (S26A) family signature 183 199 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu06g01393 325 PRINTS Bacterial leader peptidase 1 (S26A) family signature 268 287 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu06g01393 325 PRINTS Bacterial leader peptidase 1 (S26A) family signature 245 257 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu06g01393 325 MobiDBLite consensus disorder prediction 8 24 - -
Adu06g01393 325 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 160 316 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Adu06g01393 325 SUPERFAMILY LexA/Signal peptidase 185 314 IPR036286 -
Adu06g01393 325 CDD S26_SPase_I 187 301 IPR019533 GO:0004252|GO:0006465
Adu06g01393 325 Gene3D Umud Fragment, subunit A 182 315 - -
Adu06g01393 325 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01393 Adu-Chr6 21321735 21326594 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01393 195 318 MADS-box Gene Family AT1G29960 37.692 1.08e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01393 K09648 - gmx:100527429 252.677