Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01325 ATGGCAAGTCAGGGCTCTAATGAAGGCTCTAGTTCCGGCATTACATCGGCTGAGTGTTCGGATTCAACTGTTCAACTCAACATCAAGACTCTAGATTCACGTGTCTATAATTTTCAACTGGACAAAAATATGCCTGTTTCGTTGTTAAAGGAGAAAATTGCTAATGAAATTGGTCTTCCAGTTGGTCAGCAACGGCTGATTTTTAGAGGAAAAGTCTTAAAGGACGAGCATGTGCTATCTGAGTATCATATCGAGAATGGGCATACCTTGCATCTAGTTGAAAGGCAACCAAATCAGTCACAGGCTTCTGGTAATAGTACTGCTGAGCCAGCTGGTGCTAATGGAAATGATGCAGCCTCCGTGCCTCCTCGTAACCGTGTTGGACAAATTTCACACAGTGTTGTTCTTGGAACTTTTAATGTGGGGGACCAAGGAGAAGGCATTGTTCCTGACCTTACACGGGTTATTGGGGCAGTTTTGAATTCTATTGGAATTGGTGGTCAGAACACAAGTAGTCCTCCCAATGCTACCCAACCTGCTACAGCTCCGCTAGGGAATGAAGCTGCGGGCGTGAATTCTGGGAATCAAAATGCATCTGGAAATCAAGCACAGTCTGGCCAGACATTTCCTGGTCAGGCATTCCAATCTCTGCCTCATGTTGTTCAAATTCCTGTGGCTTCTGGGGCCATACCAATCCCTTCTCTCAATGCTCCAATTCCTGATTCATTGAACACACTCTCTGAATTTATAAATCGCATGGAACAGACACTATTGCTAAATGTTTATCAGTCAAATTTATCTTCAACTAATGCTGGAGATCAACGGGTTGAATTGCCTACCAATGCACAAGGGTTGCCGACAGTTGAAGCATTAAGCACCATCTTGCATCGTACAGAACAGTTGCTTAGTCATCAAGCTGTTGCTGCAATATCTCATATTGCTGGACGGTTGGAGCGAGAGGGAACTTCATCTGATTTAAGTATAAGGGATCAAATACAGTCAGAGGCAGCACACTTAGGACTTGCTATGCAGCATTTGGGCACACTTTTACTTGAGCTTGGCCGAACGATTTTAACCCTGCGTATGGGACAGTCTCCTGCAGAATCTGCTGTAAATGCTGGACCTGCAGTTTATATTTCTCCATCAGGGCCAAATCCTGTAATGGTTCAGCCCTTTCCTCTTCAGACAAACTCACTATTTGGTGGTCCTATTCCTTCTTCAACTCCTCCAGCATTTGGTGCCATTGGTATTGGAAGTGCTCCGCGGAATGTGAACATTCATATACATGCTGGTACTGCTCTTGCTCCCATTGTTTCAGCAATTAGTTCTAGGACAAATAATGGAGAAGGGACAAGAAATGAAAACCGTAATGAGCCTGGCCCTGGGGATTCAGGTTCTGCACGTGCGTTGCCCGTTAGAAATTTCATGTCGGCAGCCTTCCCATCTCACCCTCCTGGTGTTGGAGTTGCCAGTGGCACACAGACTGGGTCAGGTGTTTCTACTTCACAGCCACCACCTAATTCAACTCCATGGTCATCTGCTGCAAATGAATCGAATTTCTTTAGGAACTTAGTTCGTAATATACAAGGAGATAACACAGCTCCATCAGGTCAGATGGCATCAACTGGCCGAGACTTGTCTTCTGGTTCTGAATCAAGGTCTTCCCAGAGAGATGAGCAGGCAGATACCACCGGGATGAATGGCTTCAGAACTGCAACTGCATCCTCAGTTGGCTGTGGCTCTGTAAGTGGAGCTGTACTCCAAACTGAGTTAGTGCAAACCTGTGATAATGATGAGAGAGGTGTTTCAGTTGACAATTACCCTTCAAGTTCTTCCGGTCAAGGTTTACAAAGCTCTTCTGGTGGAGAAACAACAGTGAAATCAGAACAAGTAAAGGATGCTCCATCTGCAAGTGCGAAACAGGGTGTAGCTGAACCTGCCAGAGCTGCTCCTCTTGGATTGGGCATGGGTGGCTTAGAGCGTAAGAGGCGGACAGGACTTCAACCTCCTGTAAGTAAAGGCGCTGACATATCATCCGGTTCTTCTGTCAACCAAAGTCAGCAAACTGGAACAGAGGGTCAACACACATTACAAGCACTTCCAAGTCATGGCTCTTCTGTGAATGCAAGAAATCCTAATAGACCATCCCAGCAGCCGCTGCCCTCTAGTAATAGGCAGATTGATATGGCTGGTCTGATGTCTCAGGTTTTGCATAGCCCTGCTTTGAATGGTTTGCTTGAAGGGTTTTCACAGCAAACTGGGGTTGACTCACCTAATGGCTTGAGGAATATGTTGCAGCAGTTCACGCAGAGCCCACAGATGATGAACACAGTCAATCAAATTGTCCAACAGGTTGGCAGTCAGGATATGGGAAATATGTTTGCCGGGATGGAAAGGGGGCAAGGGGGTGGCATTGATTTTTCGACGATTCTTCAACAGATGATGCCTATTGGATCCCGAGCGGCTGGTGGGGATACTCCTCCTCCACTATTCTCTGCTGCAGAACCTGAGACCTTGGCACCTTGCAGAGATGAAAACTCCAATAATACAACTTTACAGCTCAACCTTCAAGAAGTGGTGGATAGGATTGATCACTTGAGCCCACCAGCAGATGTTTTTCGTGCTGTGGCTGAAAATGCCGTCCTGGTATCTGGGGGTGTAAATGTTACCGATGATATTCTGGATGAGTTATGCAGTAATGAGAGTCTTGCCAGCGAATATTTGGAGACGTTGCGATATGATGTGAGACAGCGGCTAGATGGACATTCTGAGCAGGACAAGTCGTAA 2787 0.4618 MASQGSNEGSSSGITSAECSDSTVQLNIKTLDSRVYNFQLDKNMPVSLLKEKIANEIGLPVGQQRLIFRGKVLKDEHVLSEYHIENGHTLHLVERQPNQSQASGNSTAEPAGANGNDAASVPPRNRVGQISHSVVLGTFNVGDQGEGIVPDLTRVIGAVLNSIGIGGQNTSSPPNATQPATAPLGNEAAGVNSGNQNASGNQAQSGQTFPGQAFQSLPHVVQIPVASGAIPIPSLNAPIPDSLNTLSEFINRMEQTLLLNVYQSNLSSTNAGDQRVELPTNAQGLPTVEALSTILHRTEQLLSHQAVAAISHIAGRLEREGTSSDLSIRDQIQSEAAHLGLAMQHLGTLLLELGRTILTLRMGQSPAESAVNAGPAVYISPSGPNPVMVQPFPLQTNSLFGGPIPSSTPPAFGAIGIGSAPRNVNIHIHAGTALAPIVSAISSRTNNGEGTRNENRNEPGPGDSGSARALPVRNFMSAAFPSHPPGVGVASGTQTGSGVSTSQPPPNSTPWSSAANESNFFRNLVRNIQGDNTAPSGQMASTGRDLSSGSESRSSQRDEQADTTGMNGFRTATASSVGCGSVSGAVLQTELVQTCDNDERGVSVDNYPSSSSGQGLQSSSGGETTVKSEQVKDAPSASAKQGVAEPARAAPLGLGMGGLERKRRTGLQPPVSKGADISSGSSVNQSQQTGTEGQHTLQALPSHGSSVNARNPNRPSQQPLPSSNRQIDMAGLMSQVLHSPALNGLLEGFSQQTGVDSPNGLRNMLQQFTQSPQMMNTVNQIVQQVGSQDMGNMFAGMERGQGGGIDFSTILQQMMPIGSRAAGGDTPPPLFSAAEPETLAPCRDENSNNTTLQLNLQEVVDRIDHLSPPADVFRAVAENAVLVSGGVNVTDDILDELCSNESLASEYLETLRYDVRQRLDGHSEQDKS 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01325 928 MobiDBLite consensus disorder prediction 166 210 - -
Adu06g01325 928 MobiDBLite consensus disorder prediction 488 515 - -
Adu06g01325 928 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Adu06g01325 928 MobiDBLite consensus disorder prediction 529 569 - -
Adu06g01325 928 PANTHER OS07G0498800 PROTEIN 6 926 - -
Adu06g01325 928 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Adu06g01325 928 CDD Ubl_ubiquitin_like 26 93 - -
Adu06g01325 928 Gene3D - 14 108 - -
Adu06g01325 928 SUPERFAMILY Ubiquitin-like 13 98 IPR029071 -
Adu06g01325 928 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 6 926 - -
Adu06g01325 928 MobiDBLite consensus disorder prediction 529 550 - -
Adu06g01325 928 MobiDBLite consensus disorder prediction 96 125 - -
Adu06g01325 928 MobiDBLite consensus disorder prediction 444 460 - -
Adu06g01325 928 MobiDBLite consensus disorder prediction 597 724 - -
Adu06g01325 928 MobiDBLite consensus disorder prediction 672 724 - -
Adu06g01325 928 MobiDBLite consensus disorder prediction 96 113 - -
Adu06g01325 928 PRINTS Ubiquitin signature 76 97 IPR019956 -
Adu06g01325 928 PRINTS Ubiquitin signature 55 75 IPR019956 -
Adu06g01325 928 MobiDBLite consensus disorder prediction 597 635 - -
Adu06g01325 928 MobiDBLite consensus disorder prediction 444 515 - -
Adu06g01325 928 SMART ubq_7 24 95 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01325 Adu-Chr6 18141813 18147444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01325 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 1.57e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01325 - - gmx:100783611 1239.56