Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01311 ATGGGAAGAGCTCCATGCTGTGAGAAAGTGGGGTTGAAGAGAGGAAGATGGACAGCTGAAGAAGATAGGATATTGACTCAATACATAGAAGAACATGGGGAGGGTTCATGGAGGTTGTTGCCCAAGAATGCTGGACTCTTAAGGTGTGCTAAGAGTTGCAGACTCAGATGGATAAACTACCTCAGATCAGATGTCAAGAGAGGCAACATCACTCCCCAAGAGGAAGAGATcattctttga 240 0.4417 MGRAPCCEKVGLKRGRWTAEEDRILTQYIEEHGEGSWRLLPKNAGLLRCAKSCRLRWINYLRSDVKRGNITPQEEEIIL 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01311 79 Gene3D - 13 66 - -
Adu06g01311 79 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu06g01311 79 CDD SANT 16 61 IPR001005 -
Adu06g01311 79 PANTHER MYB TRANSCRIPTION FACTOR 2 78 - -
Adu06g01311 79 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Adu06g01311 79 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 78 - -
Adu06g01311 79 SMART sant 13 63 IPR001005 -
Adu06g01311 79 SUPERFAMILY Homeodomain-like 15 78 IPR009057 -
Adu06g01311 79 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01311 Adu-Chr6 17973194 17973433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01311 1 79 MYB Transcription Factor Family AT3G62610 79.747 3.29e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu06g01311 Myb_DNA-binding 5.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01311 K09422 - gmx:100805532 157.147