Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01299 ATGGCTGAGACCACACCCAATCACACACAAACAGTTTCTGGATGGGCTGCTCATGATTCTTCTGGCAACATAACCCCCTACACTTTCAAAAGAAGAGACAACGGTGTTAATGACGTGAGCATAGAAATCTTGTACTGCGGGATTTGCCACACGGACATTCACTACGTTAAAAATGAATGGGGAATCACTAGGTACCCGGTTGTTCCGGGGCACGAGATCGTTGGGGTGGTAAGCAAGGTGGGGAGGGAAGTGAAGGGATTCAAAGAAGGAGACAGAGTAGGAGTGGGGTGTTTGGCAGCAACATGCTTGGAATGTGAGTATTGCAAGACCGATCAGGAGAACTACTGCGAGAAACTTGAGTTCACTTACAATGGAGTTTTCTGGGATGGTAGCATCACTTATGGTGGCTACTCAAAAATGCTGAATCTGCCAATGGACGCAACGGCACCACTGCTGTGTGCTGGAGTGACGGTGTTCAGTCCCTTGAAAGACCACGGTTTGGTTGAATCGCGAGGGAAAAGCATTGGCATTGTGGGCTTGGGTGGTCTTGGACACGTGGCTGTCAAGTTTGCCAAGGCCTTTGGACACCATGTCACTGTCATAAGCACTTCTCCTTCCAAAGAGGCGGAGGCTAAGGAGCGTTTGGGTGCCGACCATTTCATAGTCAGCTCCAACCCCAAGCAAATGCAGGGTGCCAAGAGAACCCTTGATTTCATTTTGGACACTGTTTCAGCTGAGCACTCTCTTTTGCCCATTTTGGAATTGCTCAAAGTTAATGGCACTTTGTTTATTGTGGGTGCACCCGACAAGCCATTCCAATTGCCCGCATTCCCATTGATATTTGGGAAGAGATCAATCAAAGGTGGGATCATAGGAGGAATAAAAGAAACCCAGGAAATGTTGGACGTTTGTGGGAAGCACAACATCACATGTGACATTGAATTAATCACTCCAGACAGAATCAACGAAGCTCTTCAACGTCTTGCTAACAATGATGTCCGCTACCGTTTTGTCATTGACATCGCTGCTGCCACCTCTAATAACTAA 1047 0.4747 MAETTPNHTQTVSGWAAHDSSGNITPYTFKRRDNGVNDVSIEILYCGICHTDIHYVKNEWGITRYPVVPGHEIVGVVSKVGREVKGFKEGDRVGVGCLAATCLECEYCKTDQENYCEKLEFTYNGVFWDGSITYGGYSKMLNLPMDATAPLLCAGVTVFSPLKDHGLVESRGKSIGIVGLGGLGHVAVKFAKAFGHHVTVISTSPSKEAEAKERLGADHFIVSSNPKQMQGAKRTLDFILDTVSAEHSLLPILELLKVNGTLFIVGAPDKPFQLPAFPLIFGKRSIKGGIIGGIKETQEMLDVCGKHNITCDIELITPDRINEALQRLANNDVRYRFVIDIAAATSNN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01299 348 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Adu06g01299 348 Gene3D - 15 341 - -
Adu06g01299 348 SUPERFAMILY GroES-like 18 169 IPR011032 -
Adu06g01299 348 CDD CAD1 14 340 - -
Adu06g01299 348 SMART PKS_ER_names_mod 19 339 IPR020843 GO:0016491
Adu06g01299 348 Pfam Alcohol dehydrogenase GroES-like domain 37 146 IPR013154 -
Adu06g01299 348 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 344 - -
Adu06g01299 348 Gene3D - 154 311 - -
Adu06g01299 348 PANTHER ALDEHYDE REDUCTASE 1 344 - -
Adu06g01299 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 143 309 IPR036291 -
Adu06g01299 348 Pfam Zinc-binding dehydrogenase 182 303 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01299 Adu-Chr6 17698966 17700253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01299 14 342 Monolignol Biosynthesis Gene Families AT2G21730 55.848 1.05e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01299 K00083 - gmx:100820588 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01299 06 17698966 17700253 Adu06g01299 06 17698966 17700253 ECH