Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01298 ATGGTTAACACAACGGAATCTTCCTCTAACCACCACTCCCCGCCGATGACGGCGGTCCCCCCTGAATCCGACAGCCCTAAGTTCCCGCGAAAAAATCTCCCTTCTCCATGGGCTCAGGTTGTCCGCGGCGCCGAACCCGAATCCACCGCCGGGACTCCCCAATCGCCGCCGCTGCCGTCTTCTGCCTCCTCCTCCTCCTCCTCCCTTGCTGCCAGCGTTGCGTCAGTCCCGGAGCAGCTGCCTTCTTCAGATTCCTCCTCCCCAAAGGCCGTAGCTGCCTCGCCGCTGGTGGACAACAGGAGTGTTGTGACAGCTCCTCCCGATAGCTCCGATGGCGGTGAGGGCAATGCGGGTAGGTCCAAGAAACCCGCGTGGAATAAACCTTCAAACGGGGTCGTATCTGAGGCCGGTCTTGTGATGGGAGGGTCGTGGCCTGCTTTGTCTGAATCCACCAAAGGGACTCCCAAATTGGCCGCCGAATCATCCTCCAAGACTGCCTTAGATGCATCTCTCTCCACATCTCAGGGTCCTGTAACTTCGAACGCTCCCCAAAGACAAGCTACTAGCCATGCAAAACCCAACTCTGCAACAACTTATAACATACCTAATAGGCAAAGACCAATGAAGCGTGGAGGTGGCAGCAACGTTGGGTCTGGTCCTTCTTCAAGCGGCTTTCCCAATGTTGCGCCACCTCCACCACCCTTTCCTGTATACCCAGTTCCTGCACCAGCAATTGGTTACAGTAATGTCATGCCGGGAGCTCCAGACCATTCTCCAAGAGATCATTATCGTCGTAATACCTGGGATGCAAGACCACCTGTTGGGAATTTTGTGCCTCCGATGACTGAACATCGGGGTTCATCTGAACATCGGGGTTCATCTCGCCGGGGTAATTTTGGGTCCCATCCTAGGGGAGATGGCTCCTATCATAATAATTATGGTAGTAGGCGTGATCATGATCGTGCCAATTATGGGAATGCTAGAGATGCTCATGTACACCAACCAGGGGGAATATTGAGGCACCCACCACCGAATGCTCCTTCATTTGTTAACCCCGCACATGTTGGATCCTCACCCTATGCTAACCACATGGGCTTCCATGACTTATTATATGTTTCACCAGTACAAGTAGATCCCATGAGGGGCATGCCATTCTTTCCTTCCACTCCTCTTCCTCCTTCTCCTCCTCCTCCTCCTCCTACGATGTTCTTCCATGCAGAAACTTCTTCTCCTCTTAACAATATGATTATCAAGCAAATTGAATACTACTTTAGTGATGCTAATTTAGTAAAAGATGAATATTTAAGGTCCAACATGGATGAACAGGGTTGGGTTCCCATTACGTTGATAGCAAACTTTCCTCGTGTTAAAAATTTAACAAGTAACATCCCATTGATACTGGATTCATTAAGAGGTTCAGCTATTGTCGAAGTGCAAGGTGACAAGTTAAGGAGGCATAATGAGTGGATGAGATGGCTGCCAGCGACTCATTTTCGGTCAGATTCCAGTTCAATATCTACTGGTGGACCGAATTTCAATAACCTTGCAGCTAATTTTCAAACAATCACTTTGGAAGAAGCAGCTAAAATTGAAGGTCTTATGTTTGATTTGATTTGA 1617 0.4954 MVNTTESSSNHHSPPMTAVPPESDSPKFPRKNLPSPWAQVVRGAEPESTAGTPQSPPLPSSASSSSSSLAASVASVPEQLPSSDSSSPKAVAASPLVDNRSVVTAPPDSSDGGEGNAGRSKKPAWNKPSNGVVSEAGLVMGGSWPALSESTKGTPKLAAESSSKTALDASLSTSQGPVTSNAPQRQATSHAKPNSATTYNIPNRQRPMKRGGGSNVGSGPSSSGFPNVAPPPPPFPVYPVPAPAIGYSNVMPGAPDHSPRDHYRRNTWDARPPVGNFVPPMTEHRGSSEHRGSSRRGNFGSHPRGDGSYHNNYGSRRDHDRANYGNARDAHVHQPGGILRHPPPNAPSFVNPAHVGSSPYANHMGFHDLLYVSPVQVDPMRGMPFFPSTPLPPSPPPPPPTMFFHAETSSPLNNMIIKQIEYYFSDANLVKDEYLRSNMDEQGWVPITLIANFPRVKNLTSNIPLILDSLRGSAIVEVQGDKLRRHNEWMRWLPATHFRSDSSSISTGGPNFNNLAANFQTITLEEAAKIEGLMFDLI 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01298 538 MobiDBLite consensus disorder prediction 147 204 - -
Adu06g01298 538 MobiDBLite consensus disorder prediction 251 352 - -
Adu06g01298 538 Gene3D - 404 493 IPR036388 -
Adu06g01298 538 SUPERFAMILY "Winged helix" DNA-binding domain 404 494 IPR036390 -
Adu06g01298 538 CDD LAM 414 485 - -
Adu06g01298 538 Pfam La domain 416 471 IPR006630 -
Adu06g01298 538 MobiDBLite consensus disorder prediction 1 16 - -
Adu06g01298 538 ProSiteProfiles La-type HTH domain profile. 406 495 IPR006630 -
Adu06g01298 538 PANTHER LA-RELATED PROTEIN 1B 47 528 - -
Adu06g01298 538 MobiDBLite consensus disorder prediction 48 92 - -
Adu06g01298 538 MobiDBLite consensus disorder prediction 311 327 - -
Adu06g01298 538 PANTHER LUPUS LA PROTEIN-RELATED 47 528 IPR045180 -
Adu06g01298 538 SMART la 410 486 IPR006630 -
Adu06g01298 538 MobiDBLite consensus disorder prediction 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01298 Adu-Chr6 17688864 17693060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01298 K18757 - gmx:100785504 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01298 06 17688864 17693060 Adu06g01298 06 17688864 17693060 ECH
Adu06g01298 06 17688864 17693060 Adu08g00175 08 2722733 2725283 PCT