Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01294 ATGACCACCGTGGCTTCACCTTCCTCCAGAAACCAGACGCCTTCCTCCTCATGCTTTTTTTCCTACCCCTTCGCTTCATACACCTCCGCCAATTTCGCTCCTGGAGCCTCCCCCTCGTCTCCACGCCCTTCTCCTCCTCCTTTCGCCACCATTGACGTTTTTCTTCCACCTCTTTGCCACCGTCTTGCTCCTGAAGATCTATACCACTTGATCAAGAAGGCTGTCTCAATCAGGAAGCACTTGGAGAAAAATAGGAAGGACAAGGACTCCAAATTTAAGTTAATTTTGGTAGAGAGCAGGATTCACCGCCTTGCACGTTACTACAAGAAGACCAATAAACTTCCACCCGATTTGACGCTTACTGTGTCAACACTTCTACCTGTAGTTTCTATAAATAATGACAGCAAAGATCAATTAGATTTCTCAATTGGACTTAAGATGTATAATGAGGTGCAACGTTGCTTTCTCACAGTTGGCTTGGTGTATCCAGATGATTTGTTTCTATTTCTTGTAAAAGTAAGTTGTTAA 528 0.4413 MTTVASPSSRNQTPSSSCFFSYPFASYTSANFAPGASPSSPRPSPPPFATIDVFLPPLCHRLAPEDLYHLIKKAVSIRKHLEKNRKDKDSKFKLILVESRIHRLARYYKKTNKLPPDLTLTVSTLLPVVSINNDSKDQLDFSIGLKMYNEVQRCFLTVGLVYPDDLFLFLVKVSC 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01294 175 Gene3D - 63 129 - -
Adu06g01294 175 SUPERFAMILY S15/NS1 RNA-binding domain 63 120 IPR009068 -
Adu06g01294 175 PANTHER 40S RIBOSOMAL PROTEIN S13 63 119 - -
Adu06g01294 175 CDD Ribosomal_S15p_S13e 63 120 IPR000589 GO:0003735|GO:0005840|GO:0006412
Adu06g01294 175 SMART Ribosomal_S15_2 59 121 IPR000589 GO:0003735|GO:0005840|GO:0006412
Adu06g01294 175 PANTHER RIBOSOMAL PROTEIN S15P/S13E 63 119 IPR023029 -
Adu06g01294 175 ProSitePatterns Ribosomal protein S15 signature. 77 107 IPR000589 GO:0003735|GO:0005840|GO:0006412
Adu06g01294 175 Pfam Ribosomal protein S15 63 113 IPR000589 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01294 Adu-Chr6 17648962 17650392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01294 59 126 Cytoplasmic Ribosomal Protein Gene Family AT4G00100 75.676 1.43e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01294 K02953 - aip:107630757 162.54