Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01292 ATGCAGCAAGGAGATTACACCTCCACTCCATACTATCAGTTCCCTCATCTCCCAAATTCCAATCCCAATCCCAATCCCAACCCTAACCCTAATTCCGATCCACACTCAGCCCCTTACGCATCCGCACCACCCTTCTCCTCCGGTTACGCTCCCTCCGATTACACCTCTTACTACCCTACATATCCCCCAAATCCCGATCCTATCCCTGCCCCACCCGCACCTCCTGTCCCTGCCCCTCCCTCCCCCACTGCTCCTTCCTTCACCAATTTCCCTTCCTTCAATTCTCCATCCTTTGACTCTCACCTTTCGTACCAACAACCACCGCCACATCAGCATCAACCACCACCACAACAGCAACCTTATTATCCACCTTTCGACCAGCATCAAGCGGCTCCAGCTCCGATCTACGCTCCTCCTCCACCACCACCCCCCTCCGTTACGCCACCGTACTCCGCACCGTATAGCCACGCTGGATCTACGGTCCCTCCAGCTCCCTCCGCATATGATCCACCCTACGATAACAGTCCCGCCAAGTTCGATCACTCTGGCGCTTTCTTTGACGACGGCTACAACAGCTTTAACCGTAGTAACCGTTCCGATTCGTATGGTAACCGACACGATGACGGTTTCAGCGGGTTTAACCGTGGTAATCATCGTTCTGATTACCGCGAGGAGGTGTACGGGGATGGCGTGTACGCTTACGAAGGAGGGAAGGTGGAACCGTACGGGGCTCGTGGAACCGCACCAAAATCGTCGACTTGGTCCGGTTTCGATGATTACGGGAGAGCGATCAGTCTTCCAACGGCCGCAAAGGAACCTTCCGGTGGAAGCAAGATTGTGAAGGCAGTGCCGAAGGTGGAGACGCGAGAGGATCCCGGAAGCGGGGTGCAGAAGTTCCGGGTGAAGCTCTTGGCGGAGAGTGGTGGCCAGAGCACCATGGATGTTCTGTGTCAGATTGGTTTGGATGGAATTCGAATGCTGGAACCGAATACTAGTCGAACATTGAGAATATATCCTCTTGAGAACATAACAAGATGTGAGAGGTTTGATTCGTCTACCCTTGCATTCTGGTCAAAGAGCCCAGTGGACATTGAGCCACGACGAATCAGATTGCAATCCAATAGTTACACTACCAACACACTTTTGGATACTGTAACTGCTGCCACCATACAGTACAAGGAAATGGGTGGAAGCAAAAGACCCACAGAATCGTTAAGAACTAATGAACAGCCTGCAGAGAAAAGGAAAGGATTTGGCGATTGGATGAATTTGATTAAACCTCCCAATGAAGAGAAGGATCATTGGGTCCCAGATGAAGCAGTCTCGAAATGTACAGCATGTGGCACTGATTTTGGAGCTTTCAATCGCAGGCATCACTGTAGAAATTGTGGAGATATTTTCTGTGATAAATGTACACATGGTAGAATTGCTCTAACTGCTGACGAGAATGCTCAACCAGTACGTGTTTGTGACCGATGCATGGCAGAAGTGACTCAGAGACTGAGTAATGCTAAAGAAGCAGCAAATAAACCAGTGTTGCAAAGTCATGAGGATCTTGCCAGGAAACTTCAGGAGGAGCTGGAGAGGAATCGAAAGGCATCAGGTTCCAAGTCTGAAGGATCTGGAAGACGGATGAAGGAAGTTGCATGTCCTATTTGCACTGTCCATCTGCAGGTCCAGGTACCCAGCTCAGGTTCAGAGACCATAGAGTGTGGAGTTTGCCAGCACCCATTTCTTTCTAATAATTTTATATGGACTTTTATGTTCTGCGGTTTTTCTTTTCGGCGCTTCGAGCTTGGCATAGTCGTCGCATCTCTATCACTGTCTGTCACATCCGTCCTGTTCGCACCACCCGGTCCGGCTCCTCCAGCAGTGCTATCGCACCTCGCCATAGCCACTGCGTCTGCCATCATTGGTGTGTTATGCAAAACAAAGGGATTAGTGAAACTGCCACCGAATGTAACGGTTCCGGCAGTGTTTGTGTTTGGAGATTCCATCGTGGACACAGGAAATAACAACGATAACAAGCTAACGCCGGCAAAATGCAACTACCCGCCGTATGGCAAAGATTTCAAGGGAAGCATACCGACTGGCCGCTTCAGCAATGGCAAGGTTCCGTCAGACCTTATTGTTGAAGATTTAGGTATTAAAGAGTATCTACCAGCATACTTGGATCCAAATCTCCAATCTAGTGATTTGCTTACTGGAGTGAATTTTGCATCTGGTGGTGCTGGATATGACCCTCTCACTTCACTATCAGCGGCTGCTATATCTTTATCGGGACAAGTAGATTTGTTCAAAGAATGCATAGGGAAGTTGAAAGGAGAGGTTGGAGAGGAGAGAAGCAATTTCATCCTAAACAACAGTTTCTATATTGTGGTGTTTGGAAGCAATGACATCTCCAACACCTACTTCTTGACTCGCGTTAGACAGTTACAATATGACCTTCCTACTTACACTGACATTCTCCTCAAATCAGCTTCTAATTTCTTGAAGGAATTATACCAACTTGGTGCAAGGAGAATTGCAGTATTCGGTATTCCACCCCTTGGATGTATACCATTTCAGAGGACGGCAGCTGGTGGAATAGAAAGAAATTGTGCAGAACAAATAAATGATGCTGCAAAGTTCTTTAATGCCAAACTCTCAAACAAGCTTGATTCCTTTAATCAACAATTTCCAGATGCCAGGACTGTTTACATTGATGTTTACACCCCTCTTCTCGATATCATTCTAAACTACCAAAAATATGGTTATAAAGTGGCAAACAAAGGTTGCTGTGGAACAGGGATAATAGAGGTAGTGGAATTATGCAATCGATTTGTTCCAACGTGTCCCAATGATTTGGAGTATGTCTTTTGGGATAGCTTTCACCCTACCGAGGTCGTTTACAAAAGCCTCATTTCTCCTATTGTTTCTAAATATCTCCCCAAATTCTTGTGA 2943 0.473 MQQGDYTSTPYYQFPHLPNSNPNPNPNPNPNSDPHSAPYASAPPFSSGYAPSDYTSYYPTYPPNPDPIPAPPAPPVPAPPSPTAPSFTNFPSFNSPSFDSHLSYQQPPPHQHQPPPQQQPYYPPFDQHQAAPAPIYAPPPPPPPSVTPPYSAPYSHAGSTVPPAPSAYDPPYDNSPAKFDHSGAFFDDGYNSFNRSNRSDSYGNRHDDGFSGFNRGNHRSDYREEVYGDGVYAYEGGKVEPYGARGTAPKSSTWSGFDDYGRAISLPTAAKEPSGGSKIVKAVPKVETREDPGSGVQKFRVKLLAESGGQSTMDVLCQIGLDGIRMLEPNTSRTLRIYPLENITRCERFDSSTLAFWSKSPVDIEPRRIRLQSNSYTTNTLLDTVTAATIQYKEMGGSKRPTESLRTNEQPAEKRKGFGDWMNLIKPPNEEKDHWVPDEAVSKCTACGTDFGAFNRRHHCRNCGDIFCDKCTHGRIALTADENAQPVRVCDRCMAEVTQRLSNAKEAANKPVLQSHEDLARKLQEELERNRKASGSKSEGSGRRMKEVACPICTVHLQVQVPSSGSETIECGVCQHPFLSNNFIWTFMFCGFSFRRFELGIVVASLSLSVTSVLFAPPGPAPPAVLSHLAIATASAIIGVLCKTKGLVKLPPNVTVPAVFVFGDSIVDTGNNNDNKLTPAKCNYPPYGKDFKGSIPTGRFSNGKVPSDLIVEDLGIKEYLPAYLDPNLQSSDLLTGVNFASGGAGYDPLTSLSAAAISLSGQVDLFKECIGKLKGEVGEERSNFILNNSFYIVVFGSNDISNTYFLTRVRQLQYDLPTYTDILLKSASNFLKELYQLGARRIAVFGIPPLGCIPFQRTAAGGIERNCAEQINDAAKFFNAKLSNKLDSFNQQFPDARTVYIDVYTPLLDIILNYQKYGYKVANKGCCGTGIIEVVELCNRFVPTCPNDLEYVFWDSFHPTEVVYKSLISPIVSKYLPKFL 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01292 980 MobiDBLite consensus disorder prediction 1 200 - -
Adu06g01292 980 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 425 503 IPR013083 -
Adu06g01292 980 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 438 498 IPR017455 -
Adu06g01292 980 SMART fyve_4 430 499 IPR000306 GO:0046872
Adu06g01292 980 MobiDBLite consensus disorder prediction 87 107 - -
Adu06g01292 980 Pfam GDSL-like Lipase/Acylhydrolase 659 967 IPR001087 GO:0016788
Adu06g01292 980 MobiDBLite consensus disorder prediction 1 16 - -
Adu06g01292 980 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 659 670 IPR008265 GO:0006629|GO:0016298
Adu06g01292 980 MobiDBLite consensus disorder prediction 108 122 - -
Adu06g01292 980 MobiDBLite consensus disorder prediction 133 150 - -
Adu06g01292 980 Coils Coil 513 533 - -
Adu06g01292 980 CDD PTB 280 346 - -
Adu06g01292 980 Pfam FYVE zinc finger 434 498 IPR000306 GO:0046872
Adu06g01292 980 SUPERFAMILY SGNH hydrolase 658 973 - -
Adu06g01292 980 CDD SGNH_plant_lipase_like 657 975 IPR035669 -
Adu06g01292 980 Gene3D SGNH hydrolase 650 975 IPR036514 -
Adu06g01292 980 MobiDBLite consensus disorder prediction 58 86 - -
Adu06g01292 980 SUPERFAMILY FYVE/PHD zinc finger 433 504 IPR011011 -
Adu06g01292 980 MobiDBLite consensus disorder prediction 17 33 - -
Adu06g01292 980 PANTHER PROTEIN FREE1 1 579 IPR045893 GO:0036258|GO:0043130
Adu06g01292 980 PANTHER PROTEIN FREE1 1 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01292 Adu-Chr6 17572672 17586936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01292 653 972 Pollen Coat Proteome AT1G75910 42.105 1.04e-66 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01292 - - lang:109354905 699.123