Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01263 ATGTCGTCGAAATGCAGCAAGATTCGCCACATTGTGAGGCTTCGTCAGATGCTGCGTCGCTGGCGCATCAAGGCGCGCATGTCCTCCGCTGCTAATAACCGCTCAAGCTCTTCTCCGCCGTCTGATGTTCCCGCTGGACACGTGGCGGTCTGCGTCGGCATCAACTGCACCAGATTCGTTGTGCGAGCTACTCACCTCAACCACCCTGTGTTCCAGAAGCTTCTAGTTCAGGCGGAAGAAGAGTACGGCTTCGCCAACCACGGTCCTTTGGCTATTCCCTGCGACGAAGCACTCTTTGAAGATGTTATCCGGTTCATTTCCCGCTCTGAGTCTGGATCCGGTTCGAACCGATTCTTGAACCTTGATGACTCTCAGAGACACTGCCACGTCGGAATCAGGAACAACCTTGATTTCTGGAAGCAGGAATCTCGACCGCTGCTCCACGGCTTCACTGACAAGACCATTTGGTAG 471 0.5435 MSSKCSKIRHIVRLRQMLRRWRIKARMSSAANNRSSSSPPSDVPAGHVAVCVGINCTRFVVRATHLNHPVFQKLLVQAEEEYGFANHGPLAIPCDEALFEDVIRFISRSESGSGSNRFLNLDDSQRHCHVGIRNNLDFWKQESRPLLHGFTDKTIW 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01263 156 PANTHER SMALL AUXIN-UP RNA-RELATED 4 149 - -
Adu06g01263 156 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 149 IPR003676 GO:0009733
Adu06g01263 156 Pfam Auxin responsive protein 13 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01263 Adu-Chr6 17139393 17140652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01263 4 155 Calmodulin-binding Proteins AT4G34750 54.140 4.18e-51 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01263 K14488 - qsu:112012848 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01263 06 17139393 17140652 Adu08g00143 08 2180316 2181190 PCT