Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01243 ATGGCAGGTTTATTCTCTCTAGGTCCACATCATAGCAAACAAGAAGAACAAGATCAAGAAGAAAACAACAACAACAACAGCAACATCCAATTGCTATTGAGAAACGAAGAGATCTACACCAATAGCAGCACCACCAACACCAACACCAACAGAGGGTTCGAGATATGGCCTCATCATCATCAACCGAGCTACTACTCCTTCGGTTTGGGTCCATCTAGTGAGAGAAACACCACCACCACAAACCTAAACGACGACGTTTCGGTGTCTTTCTCTGATGAGTCTAATCGGTTCGGGTTCACCGTGATGAGATCTTCTTCTTCTGGATCGGGTTTAGGAAGCGGCACCAATTGCCAAGACTGCGGTAACCAAGCCAAGAAAGACTGCCTCCACCTTCGCTGCCGAACCTGCTGCCGAAGCCGAGGGTTTCAATGTTCTACTCACGTCAAAAGCACCTGGGTTCCTGCTGCCAAACGACGCGAGCGCCAACACACTCTCGCGTCGTTACAGCAGCAGCAACCCGGGAGAGCAGGAGAAGGAGAAGGAGGAGGCGATGTTCACTCTAGACGAAGTAGAGAAGCCTCCGCTTGTGTTCCCATGCCGATTACTACTACAGGGTTGGAACTAGGGCAATTCCCTCCGGAGTTGAACTCACCGGCGGTGTTCCGGTGCGTCAAAGTCAGCCCAATGGACGCACCTGATGAGAGGTACGCGTATCAAACGGCTGTCAATATAGGAGGCCATGTTTTCAAGGGGATTCTCTACGATCAAGGTCCAGATGGTCCTTTCGCCACCAATGCCGCCGCCGCCGGTGAAGGTTCCTCCCATGGAGGAGGTGAGCCTCATCATCAACAACTCAGTCTCATAACAACCACCAGCGGTGCCGGCATCACATTTGACCCTTCACAGCTTTATCCGGCGCCGATGAATGCTTTCATGGCCGGTACGCAATTCTTTCCGCCCCCGAGAACCTAG 972 0.5206 MAGLFSLGPHHSKQEEQDQEENNNNNSNIQLLLRNEEIYTNSSTTNTNTNRGFEIWPHHHQPSYYSFGLGPSSERNTTTTNLNDDVSVSFSDESNRFGFTVMRSSSSGSGLGSGTNCQDCGNQAKKDCLHLRCRTCCRSRGFQCSTHVKSTWVPAAKRRERQHTLASLQQQQPGRAGEGEGGGDVHSRRSREASACVPMPITTTGLELGQFPPELNSPAVFRCVKVSPMDAPDERYAYQTAVNIGGHVFKGILYDQGPDGPFATNAAAAGEGSSHGGGEPHHQQLSLITTTSGAGITFDPSQLYPAPMNAFMAGTQFFPPPRT 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01243 323 MobiDBLite consensus disorder prediction 155 196 - -
Adu06g01243 323 MobiDBLite consensus disorder prediction 1 24 - -
Adu06g01243 323 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 321 - -
Adu06g01243 323 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 321 IPR007818 GO:0003700|GO:0006355
Adu06g01243 323 Pfam Domain of unknown function (DUF702) 114 259 - -
Adu06g01243 323 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 210 258 IPR006511 -
Adu06g01243 323 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 116 158 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01243 Adu-Chr6 16793252 16794403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01243 1 323 C2H2 Transcription Factor Family AT1G75520 41.918 6.72e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Adu06g01243 DUF702 2.9e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01243 - - gmx:100807290 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01243 06 16793252 16794403 Adu08g00115 08 1565795 1568290 PCT