Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu06g01243 | ATGGCAGGTTTATTCTCTCTAGGTCCACATCATAGCAAACAAGAAGAACAAGATCAAGAAGAAAACAACAACAACAACAGCAACATCCAATTGCTATTGAGAAACGAAGAGATCTACACCAATAGCAGCACCACCAACACCAACACCAACAGAGGGTTCGAGATATGGCCTCATCATCATCAACCGAGCTACTACTCCTTCGGTTTGGGTCCATCTAGTGAGAGAAACACCACCACCACAAACCTAAACGACGACGTTTCGGTGTCTTTCTCTGATGAGTCTAATCGGTTCGGGTTCACCGTGATGAGATCTTCTTCTTCTGGATCGGGTTTAGGAAGCGGCACCAATTGCCAAGACTGCGGTAACCAAGCCAAGAAAGACTGCCTCCACCTTCGCTGCCGAACCTGCTGCCGAAGCCGAGGGTTTCAATGTTCTACTCACGTCAAAAGCACCTGGGTTCCTGCTGCCAAACGACGCGAGCGCCAACACACTCTCGCGTCGTTACAGCAGCAGCAACCCGGGAGAGCAGGAGAAGGAGAAGGAGGAGGCGATGTTCACTCTAGACGAAGTAGAGAAGCCTCCGCTTGTGTTCCCATGCCGATTACTACTACAGGGTTGGAACTAGGGCAATTCCCTCCGGAGTTGAACTCACCGGCGGTGTTCCGGTGCGTCAAAGTCAGCCCAATGGACGCACCTGATGAGAGGTACGCGTATCAAACGGCTGTCAATATAGGAGGCCATGTTTTCAAGGGGATTCTCTACGATCAAGGTCCAGATGGTCCTTTCGCCACCAATGCCGCCGCCGCCGGTGAAGGTTCCTCCCATGGAGGAGGTGAGCCTCATCATCAACAACTCAGTCTCATAACAACCACCAGCGGTGCCGGCATCACATTTGACCCTTCACAGCTTTATCCGGCGCCGATGAATGCTTTCATGGCCGGTACGCAATTCTTTCCGCCCCCGAGAACCTAG | 972 | 0.5206 | MAGLFSLGPHHSKQEEQDQEENNNNNSNIQLLLRNEEIYTNSSTTNTNTNRGFEIWPHHHQPSYYSFGLGPSSERNTTTTNLNDDVSVSFSDESNRFGFTVMRSSSSGSGLGSGTNCQDCGNQAKKDCLHLRCRTCCRSRGFQCSTHVKSTWVPAAKRRERQHTLASLQQQQPGRAGEGEGGGDVHSRRSREASACVPMPITTTGLELGQFPPELNSPAVFRCVKVSPMDAPDERYAYQTAVNIGGHVFKGILYDQGPDGPFATNAAAAGEGSSHGGGEPHHQQLSLITTTSGAGITFDPSQLYPAPMNAFMAGTQFFPPPRT | 323 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu06g01243 | 323 | MobiDBLite | consensus disorder prediction | 155 | 196 | - | - | |
Adu06g01243 | 323 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Adu06g01243 | 323 | PANTHER | PROTEIN SHI RELATED SEQUENCE 7 | 1 | 321 | - | - | |
Adu06g01243 | 323 | PANTHER | PROTEIN LATERAL ROOT PRIMORDIUM 1 | 1 | 321 | IPR007818 | GO:0003700|GO:0006355 | |
Adu06g01243 | 323 | Pfam | Domain of unknown function (DUF702) | 114 | 259 | - | - | |
Adu06g01243 | 323 | TIGRFAM | LRP1_Cterm: LRP1 C-terminal domain | 210 | 258 | IPR006511 | - | |
Adu06g01243 | 323 | TIGRFAM | put_zinc_LRP1: putative zinc finger domain, LRP1 type | 116 | 158 | IPR006510 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu06g01243 | Adu-Chr6 | 16793252 | 16794403 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu06g01243 | 1 | 323 | C2H2 Transcription Factor Family | AT1G75520 | 41.918 | 6.72e-79 | 242 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | SRS | Adu06g01243 | DUF702 | 2.9e-63 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu06g01243 | - | - | gmx:100807290 | 363.999 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu06g01243 | 06 | 16793252 | 16794403 | Adu08g00115 | 08 | 1565795 | 1568290 | PCT |