Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01241 ATGGAAGGAGAATCCGCGGCAGACGAATGTTATCGGCCGTTGTCTGCTGAAGAAGAGGGAGGCGATGGAAGCGATGCCTTTGGTATTGGTAGCGACGAATTCGGTGACAAAGTTGAGAATGGGAAATTAGGGGTGGAGTCGGATGCACATGAGAATTTCGGGGACAGCTTCTTTGACAACTGGGAAGAGAGAGCAGTCGACGGTATTGCAGAGCTGGGGTGTATCAATTTCAAGGAAATAATTGCAAAGGAGATTATGATGTGCCATTTTCCGGATCGATTGGTGGCATTCTTGTTTTACAGTTTGTATGCGAATATGAATAGTTTCGCTGTGAGGAAGAATAAGATTCGGCGAAATGTGAGAAATGAGGTTACGCAACAAGAATTTGTATGTTTCCGAAAGGGGTCCAGAGAAATGGGGTCCGTTAACAACGGCATGCGACGGAAACGTGAGCCAAAGGTGGAGACCAGATGCGGCTGTGAGACAGAAATGCGCGTCCATGTGCACTCGGAAAGTGGTAGATGGATAACATCGGAAGCACACTCTGATTTGTTATCCGTGGTGTGGGAACCAGCGCTACAGAGTCCGTTTCATGGTTTGGAGAGGTCAACTGCAAAGAAGCTCACAAGGGCAATTTTCTTCAATTTCAGGCACATGCTTTTCCGCGCTTGCACATGGAAGGTACGGACACACACATGGAGCCAGACTTGTGATACATTCACTTTGTTGAGGTCAGCTAATGCGCGTAGGGAGTGGCAAGTGTGTCATTATGGTGACAATAACAGTTTCAAGTGCTCGTGCCAAATGGAGTCCCTTGGTATACCGTGTTATCAGATTGTAGCAGTACTCGCACATTTGGAGATGACTGACATACCAGACAGTCTTGTTCTTAATCGTTGGTCCAAGAGTGCTTGCTCCAAAGTAAGGGCATTTGTGGAGAAAGGTCCGTTTTGCTACGATTCAATGATCACCTGCCGCAATTGGATGTTGAACGATCTATGCAGGGAAATGTGTGTTTTGGCGTGTTGTGACGAAGCTGAATTTGCCGACATGACGGATAAAGTTCTTCATGAGATAGTACGGCTGAAAGAGATAAAGGATTGTGGTGATGCAGGAGGTCGCAATGAAGGTGGAGAAGCTTCAACACTAGAGGGATGTGTGAGGGATCCATAG 1173 0.4689 MEGESAADECYRPLSAEEEGGDGSDAFGIGSDEFGDKVENGKLGVESDAHENFGDSFFDNWEERAVDGIAELGCINFKEIIAKEIMMCHFPDRLVAFLFYSLYANMNSFAVRKNKIRRNVRNEVTQQEFVCFRKGSREMGSVNNGMRRKREPKVETRCGCETEMRVHVHSESGRWITSEAHSDLLSVVWEPALQSPFHGLERSTAKKLTRAIFFNFRHMLFRACTWKVRTHTWSQTCDTFTLLRSANARREWQVCHYGDNNSFKCSCQMESLGIPCYQIVAVLAHLEMTDIPDSLVLNRWSKSACSKVRAFVEKGPFCYDSMITCRNWMLNDLCREMCVLACCDEAEFADMTDKVLHEIVRLKEIKDCGDAGGRNEGGEASTLEGCVRDP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01241 390 Pfam FAR1 DNA-binding domain 99 178 IPR004330 -
Adu06g01241 390 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 63 181 - -
Adu06g01241 390 MobiDBLite consensus disorder prediction 1 19 - -
Adu06g01241 390 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 63 181 - -
Adu06g01241 390 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01241 Adu-Chr6 16772919 16775096 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g01241 FAR1 4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01241 - - adu:107493030 362.459