Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01201 ATGGAGGGAGAGAGACACTACAGAGGGATTCGTAGGAGGCCATGGGGCAAATTCGCTGCTGAGATTAGAGACCCAACCAGGAAAGGGACTCGTATTTGGCTTGGAACCTTTGACACTGCTGAACAAGCTGCTAGAGCCTATGACGCTGCTGCTTTCCATTTTCGTGGTCATAGAGCCATTCTCAATTTCCCAAATGACTATGTCGCTGCTTCTTCTTCTTCTTCCGGTTCTTCTAGAAGATCACAACAACAGCAAGAACATATGCATCAACTTGAGTTGGAATACTTTGACAACAAGTTGTTGGAAGAACTCCTTCAGGGGCAAGATGCTAGCTCCACAGCTGGAAACTGCATTCTGTAA 360 0.4639 MEGERHYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNDYVAASSSSSGSSRRSQQQQEHMHQLELEYFDNKLLEELLQGQDASSTAGNCIL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01201 119 MobiDBLite consensus disorder prediction 69 89 - -
Adu06g01201 119 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Adu06g01201 119 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Adu06g01201 119 ProSiteProfiles AP2/ERF domain profile. 6 64 IPR001471 GO:0003700|GO:0006355
Adu06g01201 119 PANTHER DNA-BINDING DOMAIN 6 104 IPR044808 GO:0003700|GO:0009873
Adu06g01201 119 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 104 - -
Adu06g01201 119 Pfam AP2 domain 6 57 IPR001471 GO:0003700|GO:0006355
Adu06g01201 119 MobiDBLite consensus disorder prediction 69 84 - -
Adu06g01201 119 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Adu06g01201 119 SMART rav1_2 6 70 IPR001471 GO:0003700|GO:0006355
Adu06g01201 119 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Adu06g01201 119 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01201 Adu-Chr6 16010366 16010961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01201 7 109 AP2-EREBP Transcription Factor Family AT3G23230 52.991 1.87e-37 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu06g01201 AP2 5.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01201 - - adu:107493082 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01201 06 16010366 16010961 Adu06g01201 06 16010366 16010961 ECH
Adu06g01201 06 16010366 16010961 Adu02g00843 02 13840781 13841376 PCT