Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01194 ATGACAGGTTCAGGTACACCTTGTGGAGCCTGCAAATTCTTGAGGAGAAAATGCGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAACAAGGTGCTACCCATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCCAAGCTCCTTGCTCATCTTCCTGTCGACCATCGCTGCGAAGCCGCCCTCACCATCTCATTCGAAGCTCAGGCAAGGCTTCAAGATCCAATCTATGGCTGCGTCGCACATATTTTTGCCCTACAACAACAGGTTATGAATTTACAAGCACAGTTGGCTTATTTAAGGGAACAAGCTGCACAGAGTTGTAATCTGAACCCTAATACTACTACTGCTCTTTACCCCCATCACCAAGATCTTGGAAATTCGTTCCAGATGGAGAATTCCACCATGGTTCCACACTTTCTTTCTAATAGTTCATCTAATTATCCCTCATCAGCAACACAACAATACCATGGGAATACTCGTAGTAGTCTCATGATGGAATCAAACCCTATTGAGAACTACGAAAATTCAAGCATCTCCTTTAATTCATATAGCTTTGATGAGACTTGTGACACGCTGTTCTTTGACATGAAAAGTGGATCAACTTCAATAAGTGGTCTTTGA 636 0.4277 MTGSGTPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVDHRCEAALTISFEAQARLQDPIYGCVAHIFALQQQVMNLQAQLAYLREQAAQSCNLNPNTTTALYPHHQDLGNSFQMENSTMVPHFLSNSSSNYPSSATQQYHGNTRSSLMMESNPIENYENSSISFNSYSFDETCDTLFFDMKSGSTSISGL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01194 211 Coils Coil 87 107 - -
Adu06g01194 211 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Adu06g01194 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 185 - -
Adu06g01194 211 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Adu06g01194 211 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01194 Adu-Chr6 15934381 15935266 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01194 7 192 AS2 family AT3G58190 55.612 7.00e-69 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu06g01194 LOB 5.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01194 K13945 K13944 gmx:100816960 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01194 06 15934381 15935266 Adu06g01194 06 15934381 15935266 ECH
Adu06g01194 06 15934381 15935266 Adu02g00784 02 12486094 12487719 PCT