Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01193 ATGGCTTGTTCAAGTGGAAATGGAACAAGCAGTGGTGGATCAGGTTCACCGTGTGGGGCGTGCAAGTTTCTGAGGAGGAAGTGTGCTGCAGATTGCATATTTGCACCATACTTCTGCTCAGAACAAGGGCCTGCAAGATTTGCAGCCATACATAAGGTCTTTGGTGCAAGCAACGTTTCCAAGCTCTTGCTTCATATTCCCGCTCATGATCGCTGTGAGGCTGTTGTCACCATTGCTTATGAGGCTCAAGCTCGTATCAGAGACCCCGTTTATGGTTGCGTCTCTCACATTTTCGCATTACAACAACAGGTAGCATGCTTGCAGGCACAATTGATGCAAGTGAAGGCTCAGCTGGCACAGAATCAAATAGAGAATCAATGGGCAGGGAATGTTGGTGGAGCCATGAACAATCCATTTGGTCACACCAATTACATGAACCCTCCTATATCTCCTCAGAGTTCACTTGAATCAATTGATCATCACAGCAGCAGCATCATTGATATGCATGACACAAGACCAGAGGATTTCAACTCATTCCAACAACAACAACAACAACAACAACAAGCTTCTTCTAAGAGAAGATCATATAACAACAACAACAACAATGACCTGGGTGAGCTGCAAGAGTTGGCACTTAGGATGATGAGGAACTAA 654 0.4511 MACSSGNGTSSGGSGSPCGACKFLRRKCAADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKAQLAQNQIENQWAGNVGGAMNNPFGHTNYMNPPISPQSSLESIDHHSSSIIDMHDTRPEDFNSFQQQQQQQQQASSKRRSYNNNNNNDLGELQELALRMMRN 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01193 217 ProSiteProfiles LOB domain profile. 16 118 IPR004883 -
Adu06g01193 217 MobiDBLite consensus disorder prediction 176 209 - -
Adu06g01193 217 Coils Coil 97 124 - -
Adu06g01193 217 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 216 - -
Adu06g01193 217 MobiDBLite consensus disorder prediction 176 206 - -
Adu06g01193 217 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 10 216 - -
Adu06g01193 217 Pfam Lateral organ boundaries (LOB) domain 17 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01193 Adu-Chr6 15908049 15909278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01193 4 217 AS2 family AT2G42430 54.508 6.52e-80 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu06g01193 LOB 8.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01193 K13944 - gmx:100801508 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01193 06 15908049 15909278 Adu06g01193 06 15908049 15909278 ECH
Adu06g01193 06 15908049 15909278 Adu02g00781 02 12423865 12425796 PCT