Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01190 ATGGAAGAAGAGGATACGGATCCATCGCCCCCGGGAACTGCTGGCAGATCGTATGAGTGTGTGTTCTGCAAGAGAGGCTTCACAACTGCACAAGCCTTAGGTGGACACATGAACATTCATAGAAAGGACAAGGCCAATAACAGAACCAAACCTACTACTACTTTTCTTATTCCTTCTTCAACTCAACTTCATCATTCCGATCATCATCTCGGCTTCTATTACTTTTCATCATCAACTTCCACACGGAATAACAACAACAACAACAACAATATCTATGAGGTTCATTCTGATTGTTCTTCTTCCAATCAAGGTTATTTTCCTCCACCCAAGGAGAGAAACTTGAGTTTTTGCAATAATAATAATAATCCATCATCATCATCATGTGTTGCTCAAGTTAAAGACAAGCTTGAAGCTTCTTCAATGGAGAAATAA 432 0.3958 MEEEDTDPSPPGTAGRSYECVFCKRGFTTAQALGGHMNIHRKDKANNRTKPTTTFLIPSSTQLHHSDHHLGFYYFSSSTSTRNNNNNNNNIYEVHSDCSSSNQGYFPPPKERNLSFCNNNNNPSSSSCVAQVKDKLEASSMEK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01190 143 MobiDBLite consensus disorder prediction 123 143 - -
Adu06g01190 143 ProSiteProfiles Zinc finger C2H2 type domain profile. 18 45 IPR013087 -
Adu06g01190 143 ProSitePatterns Zinc finger C2H2 type domain signature. 20 40 IPR013087 -
Adu06g01190 143 PANTHER OS07G0101800 PROTEIN 5 127 - -
Adu06g01190 143 Pfam C2H2-type zinc finger 18 42 - -
Adu06g01190 143 Gene3D Classic Zinc Finger 7 68 - -
Adu06g01190 143 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 5 127 - -
Adu06g01190 143 SUPERFAMILY beta-beta-alpha zinc fingers 15 45 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01190 Adu-Chr6 15864228 15864805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01190 18 87 C2H2 Transcription Factor Family AT5G43540 43.662 6.91e-14 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu06g01190 zf-C2H2_6 1.1e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01190 - - aip:107647878 222.631