Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01189 ATGGAAGGGAAGTATTATGTGGCAAGAAACAAGAAGAAGCATCAGAAAGAGGAGAAGAATAACAATAATAATACAAGGTTTGAAATGGAGGAGCAGCATCGTAGTAGTATTTGTTCATCATCATGGCCTGGGAGGAACTATGGGTGTAGCTTTTGCAAGAGAGAGTTCAAATCCGCACAAGCATTGGGTGGACACATGAATGTTCATAGAAGAGATAGGGCAAGATTGAGATCATCATCATCATCATCAATATGGCTTTCTTCCTCTTCTGATAAACCTAATAAACCTAACCCTAGCAGCATCCTGAAACCCAATACTAAGAACAACCCAATAATACCTTCCTCTTCATCTCTTTATTATAGCCCTAGTACCATTACTTTGTGCTCTTATTCTCCTTCAGCTTCCACAAGTAGCTGCGATAAGAAACCAAGACTCATCACATCACAGCTTCTTCCTCCCCCTCAAACGATCAGTAACAACACCACAGTCACAGCAAGGTGGAGTAGTAATTCTATAATGGAAGATGATGATGAGCACAACCACAACATCACCTTGGAATTGGGAATAGGGTTGCTTAAGCACCCAACTAACAACTTAGATTTGGAGCTTCGATTAGGCCAATGA 624 0.4087 MEGKYYVARNKKKHQKEEKNNNNNTRFEMEEQHRSSICSSSWPGRNYGCSFCKREFKSAQALGGHMNVHRRDRARLRSSSSSSIWLSSSSDKPNKPNPSSILKPNTKNNPIIPSSSSLYYSPSTITLCSYSPSASTSSCDKKPRLITSQLLPPPQTISNNTTVTARWSSNSIMEDDDEHNHNITLELGIGLLKHPTNNLDLELRLGQ 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01189 207 MobiDBLite consensus disorder prediction 78 109 - -
Adu06g01189 207 Pfam C2H2-type zinc finger 47 71 - -
Adu06g01189 207 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Adu06g01189 207 Gene3D Classic Zinc Finger 39 97 - -
Adu06g01189 207 SUPERFAMILY beta-beta-alpha zinc fingers 44 73 IPR036236 -
Adu06g01189 207 MobiDBLite consensus disorder prediction 64 109 - -
Adu06g01189 207 PANTHER TRANSCRIPTIONAL REGULATOR SUPERMAN 9 206 - -
Adu06g01189 207 PANTHER OS07G0101800 PROTEIN 9 206 - -
Adu06g01189 207 MobiDBLite consensus disorder prediction 1 29 - -
Adu06g01189 207 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01189 Adu-Chr6 15853445 15854068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01189 31 206 C2H2 Transcription Factor Family AT3G23130 38.710 8.69e-23 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu06g01189 zf-C2H2_6 8.3e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01189 - - adu:107493056 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01189 06 15853445 15854068 Adu02g00775 02 12123725 12124414 PCT