Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01185 ATGCCTCCCGAAAAGGGAACGGGAGCCGTTGATAGAGATGAATCGGAGGGCCGAAATTCAAACTTGAAGAGAGGAGCGATCCATGCGGAGGGTGTGTGGACCAATGAGAATCGAGTATTTGGATATAATCCTACACATACTTTATTATTTAAACCACGTAATTTCCGTCTTCTTCTCTCACACCCAAAAAATTTCCTCAGTAAGCTACGTCCTTCGCAGATCCACCTCGAAGCAACCGCCGAGCCACCTCCGGAGGCAGAGCCCGAGAACCCAACTCCCAAGCCCAAGAAGGCCGCTAAGGAGCCCAAGCCCAAAAAACCCGCGGCTCCTAGATCCCGAAACCCCTCTCACCCTCCCTACGAAGAGATGGTTAAGGACGCGATTGTGACGTTGAAGGAGAAAAACGGTTCCAGTCAATACGCGATTCAGAAGTTCGTAGAAGAGAAGCAGAAGCAGCTACCTTCCAACTTCAGGAAGCTCTTGTTGTATCATTTGAAGAAGCTCGTTTCTTCTGGAAAGCTCGTTAAGGTCAAAGGCTCCTTCAAGCTTCCTCCGGTCAGGTCTGCAGCTCCCAAACCAGCTGCTGCTGCCCCCGCCAAGAAGAAGGCTGCAGCTGCTAAGCCCAAACCAAAGCCCAAGCCCAAAGCTAAGCCTGCTTCTAAGGCCAAGGACACCAAAACTACTAAGTCAGCAGCAGCCAAAGCACCTGCCAAGGCCAAGCCCGCTGCAAAGCCCAAGCCCAAGGCCAAGCCAGCTGCTAAACCCAAGGCGGTTGCTGCTAAGACCAAGGCAGCTCCGGCCAAGTCTAAGGCCAAGGCTAAGACGGCGCCAGCTGCAAAGCCGAAGGCAGCTGCGAAGCCTAAACCGGCTGCTAAGCCCAAGCCCAAGCCCAAAGAGAGGCCCTCCAAGGCTTCTAGAACGTCGACGAGAACTTCACCGGGGAAGAAAGCCCCTGCCGCTAAACCTGCGGCGAAGAAGGCAGCTCCCGCGAAGAAAGCCCCTTCAAAGGGTGCAAAGGCGAAGACCTGTTGTAGGTTTAGTCATTGGAACGGAATTGCGGTTGTGGTCATTGGCTTTGTCGGATCTCTAAATGGTTGA 1098 0.5346 MPPEKGTGAVDRDESEGRNSNLKRGAIHAEGVWTNENRVFGYNPTHTLLFKPRNFRLLLSHPKNFLSKLRPSQIHLEATAEPPPEAEPENPTPKPKKAAKEPKPKKPAAPRSRNPSHPPYEEMVKDAIVTLKEKNGSSQYAIQKFVEEKQKQLPSNFRKLLLYHLKKLVSSGKLVKVKGSFKLPPVRSAAPKPAAAAPAKKKAAAAKPKPKPKPKAKPASKAKDTKTTKSAAAKAPAKAKPAAKPKPKAKPAAKPKAVAAKTKAAPAKSKAKAKTAPAAKPKAAAKPKPAAKPKPKPKERPSKASRTSTRTSPGKKAPAAKPAAKKAAPAKKAPSKGAKAKTCCRFSHWNGIAVVVIGFVGSLNG 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01185 365 CDD H15 115 185 IPR005818 GO:0000786|GO:0003677|GO:0006334
Adu06g01185 365 PANTHER HISTONE H1 229 342 - -
Adu06g01185 365 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 116 185 IPR005818 GO:0000786|GO:0003677|GO:0006334
Adu06g01185 365 SUPERFAMILY "Winged helix" DNA-binding domain 113 195 IPR036390 -
Adu06g01185 365 MobiDBLite consensus disorder prediction 78 123 - -
Adu06g01185 365 Pfam linker histone H1 and H5 family 117 183 IPR005818 GO:0000786|GO:0003677|GO:0006334
Adu06g01185 365 PRINTS Histone H5 signature 103 124 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Adu06g01185 365 PRINTS Histone H5 signature 231 248 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Adu06g01185 365 PRINTS Histone H5 signature 201 215 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Adu06g01185 365 PRINTS Histone H5 signature 130 147 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Adu06g01185 365 PRINTS Histone H5 signature 253 272 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Adu06g01185 365 MobiDBLite consensus disorder prediction 7 23 - -
Adu06g01185 365 MobiDBLite consensus disorder prediction 90 108 - -
Adu06g01185 365 PANTHER HISTONE H1.1 78 258 - -
Adu06g01185 365 Gene3D - 111 189 IPR036388 -
Adu06g01185 365 MobiDBLite consensus disorder prediction 182 340 - -
Adu06g01185 365 SMART h15plus2 114 180 IPR005818 GO:0000786|GO:0003677|GO:0006334
Adu06g01185 365 MobiDBLite consensus disorder prediction 1 26 - -
Adu06g01185 365 PANTHER HISTONE H1.1 229 342 - -
Adu06g01185 365 PANTHER HISTONE H1 78 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01185 Adu-Chr6 15733376 15734977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01185 121 211 Single Myb Histone (SMH) Gene Family AT1G49950 35.106 1.39e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01185 K11275 - pvy:116120946 132.109