Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01182 ATGCTCGGCAAGACAGAGGCGGCCGACGACATAAGCTATGCCCCGACCTTCCGACGACGAGGGCGACAGAAGCTTCAAATGGACCACCCGACAACGACGATGGCGATAGAAGCTTCGAGTGGTGATGGTGGCAACGACTGGTGGCCACTGCCGGTGCCGATAGTGTTGCCAAATCATAGTGGGATCAGTGAAGAAGAAATCTCAGTCATAGGAATGATTTTTGATTCATTGCATTTGGCACAGGAGTTTTATGCAAATTATGCAAAGAAAGTGGGGTTCGTAACTAAAGTCAGGAACACAAACTTTGACAAGACACGGAAGAAATCAAAGATACCCGTTAATCAATTTCTTCACTGCACTCGAGAGGGTTATCAGGAATCTCGGGTTAAGGCAGCAACTAGGGAAAACAGAATAACAGCCACGATATGCAGAACAAGGATGTATGTCATGCTGGATAGGGAGAAGGAATGTTGGGTTGTGTCTAGGCATGGTATACCGTTTGCATCCTTTGTCGGTTTAAACCACCATGAGAAGTCTACTCTTCTTGGCTGTGCTTTACTTGGGAGCGAGGAGATCCCTAGTTTTGAGTGGGTGTTCACGCAGTGGGTGAGATGCATCGGGACTACACCAAGGGAGATCATCACTGACCAGTGCAAGAAATCACAATTCAAGTTTAGTGGCTACGTTAGGTACGGAGAATTGAATGTAATGATGAATCACATTGTGTGGAATTCTCCTTCGCCTGAATCGTTTGAAGCTGATTGGGCTGGTTTCATCAAAGAATTTGACTTAGGCCATAACAGATGGTTAGCAGTAGAGTTTGACCCTTTGAGTCAAAAGGGTCGGTGCGAGTGCAACAAGTTTGAATCCGGTGGTATATTGTGTTGTCACACCCTTGCGGTGTGGTCATACTACAGAGTTGACATAGTACCGAGCTGCTATGTTCTTCCTCGATGGAGTAAGAATGTCATCCGCAAGCACACTTACATTAAAAGCAGCCATGACGTGGCTCGGACCGATGAAAGCCACAATTTATTCAGGCGTCTGTGTTCAGAGTTCTATAACATTGCTCATGAGTTTGTTGCTTGTGATGAGGAAACAGCCATCTTGTGA 1113 0.4609 MLGKTEAADDISYAPTFRRRGRQKLQMDHPTTTMAIEASSGDGGNDWWPLPVPIVLPNHSGISEEEISVIGMIFDSLHLAQEFYANYAKKVGFVTKVRNTNFDKTRKKSKIPVNQFLHCTREGYQESRVKAATRENRITATICRTRMYVMLDREKECWVVSRHGIPFASFVGLNHHEKSTLLGCALLGSEEIPSFEWVFTQWVRCIGTTPREIITDQCKKSQFKFSGYVRYGELNVMMNHIVWNSPSPESFEADWAGFIKEFDLGHNRWLAVEFDPLSQKGRCECNKFESGGILCCHTLAVWSYYRVDIVPSCYVLPRWSKNVIRKHTYIKSSHDVARTDESHNLFRRLCSEFYNIAHEFVACDEETAIL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01182 370 SMART 26again6 281 308 IPR006564 GO:0008270
Adu06g01182 370 PANTHER OS01G0607050 PROTEIN 273 365 - -
Adu06g01182 370 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 273 365 IPR031052 GO:0006355
Adu06g01182 370 ProSiteProfiles Zinc finger SWIM-type profile. 268 306 IPR007527 GO:0008270
Adu06g01182 370 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 162 272 IPR031052 GO:0006355
Adu06g01182 370 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 68 161 IPR031052 GO:0006355
Adu06g01182 370 Pfam FAR1 DNA-binding domain 82 161 IPR004330 -
Adu06g01182 370 PANTHER OS01G0607050 PROTEIN 162 272 - -
Adu06g01182 370 Pfam MULE transposase domain 162 220 IPR018289 -
Adu06g01182 370 PANTHER OS01G0607050 PROTEIN 68 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01182 Adu-Chr6 15685143 15687841 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g01182 FAR1 3e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01182 - - adu:110274824 341.658