Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu06g01179 | ATGTACAATAAGATTAGCGTGGTTGTAATGCAGGCAATGATGTATGGGACTAGCAAATGCACTCTTTGCCTAAGTAATCATCAACATCCAACAGCTACATCCTGTGGCCATGTATTTTGCTGGAACAATGAAAAGCCAGAATGTCCTCTTTGCCGCATCCCAATAACACATTCAGGTCTAGTTTGTCTGTGTCATTCAGACTTCTAG | 207 | 0.4155 | MYNKISVVVMQAMMYGTSKCTLCLSNHQHPTATSCGHVFCWNNEKPECPLCRIPITHSGLVCLCHSDF | 68 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu06g01179 | 68 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 35 | - | - | |
| Adu06g01179 | 68 | PANTHER | PEROXISOME ASSEMBLY PROTEIN 10 | 17 | 65 | - | - | |
| Adu06g01179 | 68 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 9 | 61 | IPR013083 | - | |
| Adu06g01179 | 68 | PANTHER | PEROXISOME BIOGENESIS FACTOR 10 | 17 | 65 | - | - | |
| Adu06g01179 | 68 | SUPERFAMILY | RING/U-box | 10 | 61 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Adu06g01179 | 20 | 52 | C3H Transcription Factor Family | AT2G42030 | 36.585 | 3.12e-07 | 43.5 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu06g01179 | K13346 | - | egr:104437924 | 107.071 |