Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01178 ATGGAGGAAGTTGAAGAAGCTAACAGAGCTGCTGTTGAGAGCTGCCATAGAGTTTTAACAGTGTTGTCTCAGCCTCAGGATCAAGTTCAATATAGGAATTTAATGGTAGAAACTGGTGAAGCTGTGGTGAAGTTCAAGAAAGTTGTTTCCTTGCTTAGTAGTAGTTTGGGAACTGGGTTTAACANNNNNNNNNNNNTAACTCTGGCTGCGAAACCGGCCTTCGAATTGAGCTCCAATGGCAATGGGAATGGGAAGAGTCCTCTTCAACTTGCTCAACAACTCTCATCAACACACTATCATATTCTTCAGCAGCAGCAGCAACAACAAAGGGCATTGCTGCTGCATCATCAGCAGCAGCAGCAACAAATGAAACATCAAGCCGAAATTATGTACAGAAGGAACAACATTAACAATAGCAATAACTGCAGCAGCAACAACAACAGTGTCATAAATCTGAATTTTGATAATAGCTCTAGCTGCACACCAACAATGTCGTCTACTAGGTCTTTTATTTCTTCCCTTAGCATAGATGGGAGCGTGGCGAACATGGAAGGAAGCGCCTTCCATCTAATCGGAGCTGCGCGCTCTTCTGATCAGAATTCCCAACAGCACAAGAGAAAATGTTCTGCTAGAGGCGACGAGGCGAGCGGTGGCAAATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATCAAGGTGCCTGCTATCAGCAACAAACTTGCAGATATCCCTCCTGATGATTATTCGTGGAGGAAGTACGGGCAGAAGCCCATCAAGGGGTCTCCACACCCCAGGGGGTATTATAAGTGCAGCAGCATGAGAGGGTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTTCAATGCTAATAGTTACCTATGAAGGGGAGCACAACCACCCTAAATTATCAACACAATCTGCAAACGCATGA 948 0.4483 MEEVEEANRAAVESCHRVLTVLSQPQDQVQYRNLMVETGEAVVKFKKVVSLLSSSLGTGFNXXXXXTLAAKPAFELSSNGNGNGKSPLQLAQQLSSTHYHILQQQQQQQRALLLHHQQQQQQMKHQAEIMYRRNNINNSNNCSSNNNSVINLNFDNSSSCTPTMSSTRSFISSLSIDGSVANMEGSAFHLIGAARSSDQNSQQHKRKCSARGDEASGGKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPKLSTQSANA 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01178 315 SUPERFAMILY WRKY DNA-binding domain 245 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu06g01178 315 Pfam WRKY DNA -binding domain 249 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g01178 315 Pfam Plant zinc cluster domain 205 245 IPR018872 -
Adu06g01178 315 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 110 314 IPR044810 GO:0003700
Adu06g01178 315 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 110 314 - -
Adu06g01178 315 ProSiteProfiles WRKY domain profile. 242 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g01178 315 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 55 IPR044810 GO:0003700
Adu06g01178 315 SMART WRKY_cls 247 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g01178 315 Gene3D WRKY domain 232 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu06g01178 315 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01178 Adu-Chr6 15663101 15664728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01178 1 315 WRKY Transcription Factor Family AT5G28650 49.856 1.74e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu06g01178 WRKY 3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01178 - - pop:7479993 373.629