Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu06g01138 | ATGTCGAGCTCCAGCAGCCATAATCTAAATGCTACTCCACTCATCGTTGACATCGCCAACACCTTTACCAGACTCACTTCTCCCCCATTAACCTCACCAAAACAACGCTGGCGTTTCGCTTATACCAAAATCTATTCTGGAAGAGTCTTTGTGTCCCTTGCGAAAGAGATCGTCTCCAAAAGAAATCACAATCAATTCCTTCTTCGTGATGATATAATAGAGCCTCTAGTTCACTGCAACAATTCCTTCCTGGCTGTTCCTCATGATGCTGATAAATCCAAGCTTGTTAACATGGTTAAGGACAAAAGCTTGGACTCTCTTGCTTCCTTTGGAGGCGTGGAGGCTGTAGCTTATGTCATTGGAACTGTTCCATCGAAGGGAATTGACGACAAAGAAGAAGAAATTGCCAAGCGTCGCGATATCTTTGGCTCCAACACTTACCCTCGTCCGCCGCCAAAAGGACTCCTCCACTTTGTTCTTGAAGCCTTCAATGACACCACAATAATCATCCTTCTTGTTTGCGCCGGCCTTTCACTCGGCTTTGGAATCAAACAGCACGGTGCAGGGGAAGGTTGGTATGAAGGTGGAAGCATATTCGTGGCGGTGTTGTTGGTGGTTGTTGTAAGCTCAGTCAGCAACTTGAGGCAGGAGAGGCAGTTTCACAAGCTGTCCAAGATTAGCAGTGACATCAAGGTTGATGTTGTGAGGAATGGAAGGCCGCAACAGATTTCGATTTTCGACGTTCTTGTGGGAGATATCGTTTCACTCAAGATTGGGGATCAAGTTCCCGCTGATGGATTGTTCATATCTGGTCATGCTCTTCATGTTGATGAATCAAGCATGACAGGGGAGAGTGATCATGTCGAAATTGAGCCGTTAAATAGTCCTTTCTTGTTGTCCGGCGCCAAAGTGGTCGACGGTTATGCAACAATGATGGTGACGTCCGTCGGAACTAACACGGCGTGGGGACAGTTGATGAGCACGGTATCAAGAGGTGACACGGAGGAGAGGACGCCGTTGCAGGCGCGTCTCGATAGCTTGACTACATCGATAGGAAAAGTAGGCCTCTCGGTTGCACTCCTTGTGTTTGTGGTAATGCTTATTCGTTATTTTACTGGAAACACCAGCAGTGAAGACGGTTATACAGAGTTCAAGAAAGGTAGTACTGATTTGAGTGATGTGTTCAATGCTGTTGTGAAGATAATTGCGGTTGCAGTCACCATTGTGGTCGTGGCGATCCCTGAAGGATTGCCATTGGCTGTCACTCTCACCTTGGCTTATTCCATGAAGAGAATGATGGCAGATCAGGCTATGGTGAGGAAACTCTCTGCTTGCGAAACTATGGGGTCGGCAACGGTTATATGCACTGATAAAACTGGGACTCTGACTCTCAATGAGATGAGAGTGAACAAGTTCTGGTTAGGCCTTGAAAACATCATTGAGAATTATTCCAATGCAATGGCCAAGAGAGTTGTGGAATTGTTCCACCAGGGAATAGGCCTCAATACAACTGGCAGTGTATATAAGCCTTTGCCGGAATCCGGGCCTGAAATCTCTGGTAGCCCTACAGAGAAAGCTATTCTCTTGTGGGCTGTGTCAGATTTAAGCATGGACATGGATGGACTAAAGCAGAAACATGAGATCATCCATGTTGAAACGTTTAACTCGGAGAAGAAACGAAGCGGGGTAGCAGTAAGGAAGAAGAGTGACAATACAGTACATGTACATTGGAAAGGTGCTGCTGAGATGATACTTGCAATGTGTTCTAACTACATTGATTGTAATGGCACAGAGAAGTCCCTTGGTGAAAAAGAACGGGATGAAATTGAGAAAATAATTCAGGGAATGGCAGCTAGTAGCCTAAGATGCATTGCTTTTGCTCACATTGAAATCGACTACAGCGATGATAAGGTACTAAGAGAAGATGGCTTGACCTTGCTAGGAATCGTCGGCCTTAAGGATCCATGCCGGCCGGAAGTCAAGAAGGCTGTGGAAACTTGCAAGTATGCAGGTGTTGATATCAAGATGATCACCGGAGATAACTTATTCACGGCAAAGGCAATAGCAACAGAATGTGGAATACTAGACCTTAGTGATGATGTAGCCAAGGGACAAGTGGTGGAAGGTGAGGAATTTCGGAACTACACGGAGGAAGAGAGAATGGAGAAAGTAGATGATATTCGAGTGATGGCGAGATCTTCTCCTTTGGACAAACATTTGATGGTGCAATGCTTAAGAAAGAAAGGCCATGTAGTTGCAGTCACAGGAGATGGCACCAACGATGCGCCTGCGCTAAAAGAAGCTGATATTGGACTTTCTATGGGAATCCAAGGCACTGAAGTTGCCAAGGAAAGTTCTGACATTGTTATCTTGGATGACAACTTCAATTCTGTTGCAACGGTTTTAAGGTGGGGAAGATGTGTATATAACAATATACAGAAATTTATCCAATTTCAACTAACAGTGAATGTTGCAGCACTTGTGATAAATTTTATAGCTGCAGTTTCTGCTGGTGATGTTCCCTTAACAACAGTTCAACTTCTATGGGTTAATCTCATTATGGATACTCTAGGTGCTCTGGCCCTGGCCACGGAACGGCCTACAAAGGAGTTAATGGAGAAACGGCCGGTGGGGCGTACCGAGCCGCTTATCACTAACATTATGTGGAGAAACCTTTTACCTCAAGCTTTGTATCAGATTGCAGTCTTATTGGTTTTCCAATTCAAAGGGAAGGCAATATTCAATGTAGATGAGAAGCTTTTTCATGGCCACTGGCTTGCGTGGACCAACGAGAAAAGAACGAAGCAGAGTCTTCATCGATATGATTCGTTCATTCATTCTATTAGGTGCAGACGGCAAAGAAAGTTTCAATGGTTTTCTACGTGA | 2886 | 0.4491 | MSSSSSHNLNATPLIVDIANTFTRLTSPPLTSPKQRWRFAYTKIYSGRVFVSLAKEIVSKRNHNQFLLRDDIIEPLVHCNNSFLAVPHDADKSKLVNMVKDKSLDSLASFGGVEAVAYVIGTVPSKGIDDKEEEIAKRRDIFGSNTYPRPPPKGLLHFVLEAFNDTTIIILLVCAGLSLGFGIKQHGAGEGWYEGGSIFVAVLLVVVVSSVSNLRQERQFHKLSKISSDIKVDVVRNGRPQQISIFDVLVGDIVSLKIGDQVPADGLFISGHALHVDESSMTGESDHVEIEPLNSPFLLSGAKVVDGYATMMVTSVGTNTAWGQLMSTVSRGDTEERTPLQARLDSLTTSIGKVGLSVALLVFVVMLIRYFTGNTSSEDGYTEFKKGSTDLSDVFNAVVKIIAVAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNEMRVNKFWLGLENIIENYSNAMAKRVVELFHQGIGLNTTGSVYKPLPESGPEISGSPTEKAILLWAVSDLSMDMDGLKQKHEIIHVETFNSEKKRSGVAVRKKSDNTVHVHWKGAAEMILAMCSNYIDCNGTEKSLGEKERDEIEKIIQGMAASSLRCIAFAHIEIDYSDDKVLREDGLTLLGIVGLKDPCRPEVKKAVETCKYAGVDIKMITGDNLFTAKAIATECGILDLSDDVAKGQVVEGEEFRNYTEEERMEKVDDIRVMARSSPLDKHLMVQCLRKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSAGDVPLTTVQLLWVNLIMDTLGALALATERPTKELMEKRPVGRTEPLITNIMWRNLLPQALYQIAVLLVFQFKGKAIFNVDEKLFHGHWLAWTNEKRTKQSLHRYDSFIHSIRCRRQRKFQWFST | 961 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu06g01138 | 961 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 111 | 928 | IPR023298 | - | |
Adu06g01138 | 961 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 726 | 835 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Adu06g01138 | 961 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 198 | 373 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Adu06g01138 | 961 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 396 | 491 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Adu06g01138 | 961 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 461 | 660 | IPR023299 | GO:0000166 | |
Adu06g01138 | 961 | Pfam | Cation transporting ATPase, C-terminus | 840 | 922 | IPR006068 | - | |
Adu06g01138 | 961 | Pfam | E1-E2 ATPase | 230 | 433 | - | - | |
Adu06g01138 | 961 | Gene3D | - | 452 | 800 | IPR023214 | - | |
Adu06g01138 | 961 | Gene3D | - | 465 | 655 | IPR023299 | GO:0000166 | |
Adu06g01138 | 961 | SMART | Cation_ATPase_N_a_2 | 109 | 183 | IPR004014 | - | |
Adu06g01138 | 961 | PANTHER | CATION TRANSPORTING ATPASE | 26 | 920 | - | - | |
Adu06g01138 | 961 | SFLD | C1.7: P-type atpase like | 437 | 808 | - | - | |
Adu06g01138 | 961 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 98 | 916 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Adu06g01138 | 961 | Pfam | Cation transporter/ATPase, N-terminus | 111 | 178 | IPR004014 | - | |
Adu06g01138 | 961 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 26 | 920 | - | - | |
Adu06g01138 | 961 | SUPERFAMILY | Calcium ATPase, transduction domain A | 231 | 329 | IPR008250 | - | |
Adu06g01138 | 961 | SFLD | p-type atpase | 437 | 808 | IPR044492 | - | |
Adu06g01138 | 961 | CDD | P-type_ATPase_Ca_PMCA-like | 135 | 888 | - | - | |
Adu06g01138 | 961 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 457 | 463 | IPR018303 | - | |
Adu06g01138 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 755 | 774 | - | - | |
Adu06g01138 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 779 | 791 | - | - | |
Adu06g01138 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 670 | 680 | - | - | |
Adu06g01138 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 648 | 659 | - | - | |
Adu06g01138 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 455 | 469 | - | - | |
Adu06g01138 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 277 | 291 | - | - | |
Adu06g01138 | 961 | PRINTS | H+-transporting ATPase (proton pump) signature | 787 | 812 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Adu06g01138 | 961 | PRINTS | H+-transporting ATPase (proton pump) signature | 609 | 627 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Adu06g01138 | 961 | PRINTS | H+-transporting ATPase (proton pump) signature | 755 | 771 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Adu06g01138 | 961 | SUPERFAMILY | HAD-like | 453 | 860 | IPR036412 | - | |
Adu06g01138 | 961 | Gene3D | - | 132 | 330 | - | - | |
Adu06g01138 | 961 | Gene3D | - | 161 | 928 | - | - | |
Adu06g01138 | 961 | Pfam | haloacid dehalogenase-like hydrolase | 453 | 769 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu06g01138 | Adu-Chr6 | 15099914 | 15103868 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu06g01138 | 34 | 920 | Primary Pumps ATPases | AT3G63380 | 68.904 | 0.0 | 1173 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu06g01138 | K01537 | - | gmx:100790034 | 1373.22 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu06g01138 | 06 | 15099914 | 15103868 | Adu06g01138 | 06 | 15099914 | 15103868 | ECH | |
Adu06g01138 | 06 | 15099914 | 15103868 | Adu02g01392 | 02 | 51205175 | 51206441 | PCT |