Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01135 ATGAACTATCTGTATCCGGTGAAGGAAGAGTACCAGGAGGAAGCATCGTCGTCGTCGTACTTTGTGGCTGGAAATGACGAGACGAGGATGGTTCCTCCGCCGCAGCCAATGGAGGGGCTCCACGAAGCGGGGCCACCACCATTCCTGACGAAGACGTTCGACGCGGTGGACGATCCGGCCACAGACCACGTAGTGTCGTGGAGCCGAAGCGGAGCAAGCTTCGTGGTTTGGGATCCGCACGCCTTCTCCAGAGGCCTTCTTCCAAGATACTTCAAGCATAACAACTTCTCCAGCTTCGTAAGGCAGCTCAACACTTACGGTTTTAGAAAGATTGATCCAGATAAATGGGAATTTGCGAATGAAGGGTTTGTGAGAGGGCACAGGCACCTGTTGACAAGTATAAGGAGAAGGAAGGCGCCTCCGCCACCAATCCAAACGCAGACTTCGCAGTCGCAGCAGGGTCACTGCCTTGAAGTAGGGCGATTCGGATTGGATGAAGAGATCGACCGGTTGAGGCGTGACAAGCAGGTTTTGATGATTGAGCTTGTGAGGCTAAGACAGCAGCAACAAACCACAAGATCGTATCTTCAGGCAATGGAGCAGAGGCTGAAAGGTACTGAGATCAAGCAGCAGCAGATGATGGCTTTCTTGGCCAAAGCAATGAAGAACCCCGTGTTTATACAGCAACTCATACAGCACAAGGAGAAAAGGAAGGAGCTTGAGGATGCCATGACCAAGAAGAGGAGGAGGCCCATTGAGCAAGGGCCTAGTTGCAGCACCACTACTGTTAAGGTTGAGAATCCACCAGAGTTTGCTGGTTATGCTGGTGGCTTTGGAGCTTCTGAGCTTCAAATTCTGGCTATGGAGATGCAAGGATATGGTAGAGGGAGGCGAGAGAGTACTGAACATGAGCATGAGCAAGAGCAAGAGCAAGAGCAAGAGAGGCTTGACAAGGAGCTTGATGACGAAGGCTTCTGGGAAGAGCTGTTCAGTGAGAATTTTGAGGGTGATTTGGACATTTCACAAGATGAAGAAGAGGATGTTAATGTGTTGGCCAATCGGCTGGGAGGGTTCATCCGGTGGATGGAATTTCAACTGTTCAAGCTCATCATCACCTCAATTGGGGGCAAGACAGTTGCAGGCGTTGATTGGAACAAGGATTCTATGGTAGTGATAGCGGTACTATTACTCAAGATGATTGAGAAGATGTAG 1212 0.5025 MNYLYPVKEEYQEEASSSSYFVAGNDETRMVPPPQPMEGLHEAGPPPFLTKTFDAVDDPATDHVVSWSRSGASFVVWDPHAFSRGLLPRYFKHNNFSSFVRQLNTYGFRKIDPDKWEFANEGFVRGHRHLLTSIRRRKAPPPPIQTQTSQSQQGHCLEVGRFGLDEEIDRLRRDKQVLMIELVRLRQQQQTTRSYLQAMEQRLKGTEIKQQQMMAFLAKAMKNPVFIQQLIQHKEKRKELEDAMTKKRRRPIEQGPSCSTTTVKVENPPEFAGYAGGFGASELQILAMEMQGYGRGRRESTEHEHEQEQEQEQERLDKELDDEGFWEELFSENFEGDLDISQDEEEDVNVLANRLGGFIRWMEFQLFKLIITSIGGKTVAGVDWNKDSMVVIAVLLLKMIEKM 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01135 403 PRINTS Heat shock factor (HSF) domain signature 86 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g01135 403 PRINTS Heat shock factor (HSF) domain signature 48 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g01135 403 PRINTS Heat shock factor (HSF) domain signature 99 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g01135 403 Gene3D - 40 138 IPR036388 -
Adu06g01135 403 SMART hsfneu3 44 137 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g01135 403 Coils Coil 230 250 - -
Adu06g01135 403 ProSitePatterns HSF-type DNA-binding domain signature. 87 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g01135 403 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 15 350 - -
Adu06g01135 403 MobiDBLite consensus disorder prediction 293 316 - -
Adu06g01135 403 Coils Coil 302 322 - -
Adu06g01135 403 MobiDBLite consensus disorder prediction 243 264 - -
Adu06g01135 403 Coils Coil 168 188 - -
Adu06g01135 403 MobiDBLite consensus disorder prediction 295 316 - -
Adu06g01135 403 SUPERFAMILY "Winged helix" DNA-binding domain 44 137 IPR036390 -
Adu06g01135 403 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 15 350 IPR027725 -
Adu06g01135 403 Pfam HSF-type DNA-binding 48 137 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01135 Adu-Chr6 15058019 15060028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01135 22 356 HSF AT3G22830 52.575 2.65e-121 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Adu06g01135 HSF_DNA-bind 2.7e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01135 K09419 - gmx:100794264 492.656