Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01115 ATGCGAAGAAGAAGAAGGAACAACCTCACGCACTTGGACCAATGCTTCTCAAATTTCATAAACCCTTTCATTCTTCATCAATCTCAATTATCCCCTAATAATAATAATTCCCCGCCATCATCCATCGTCCATCACGATCGCCAGATCAATCACAACCGTCCATCATCATCAACCTCAATCATCAAGAACTTCAACACTATCTACGACAATAACACCACCGAACCCGAACCCGAACCTGAACCCGAACCTGCAGACTTCGCCACCGCATTTGCCTCCCAACGCTTCTTCTTCTCCTCCCCCGGTCGATCCAACTCCATCGTCGAATCCACCCCGTCCTCTTCCTCCTCTTCATCACTAACTTCGTCGTTAACCACCACTGCGCCGGCGGAAGCTTCCTCGGCTTCGGCCGGCGACGAAAGTAAGGCGGTGTTGTTTGAGGGGAGCGTGGCGGTGCCGACGTACTCGCCAGATCCTTACTTGGACTTCCGGCAATCGATGGAGGAGATGGTGGAGGCTCGACCGGAGCTCATGGCGGACGTGAAGTCCAACTGGCACGTGCTGCAAGAGCTTCTGATGTGCTACCTTGCTCTGAACCCGAAGAGCACGCACAAATTCATTCTCGGTGCCTTCGCTGATCTTCTCGTTACACGCATGGCGTTTTCTGACGGTGGCGGTGGCGGTGGCGAAGAATAA 693 0.5281 MRRRRRNNLTHLDQCFSNFINPFILHQSQLSPNNNNSPPSSIVHHDRQINHNRPSSSTSIIKNFNTIYDNNTTEPEPEPEPEPADFATAFASQRFFFSSPGRSNSIVESTPSSSSSSSLTSSLTTTAPAEASSASAGDESKAVLFEGSVAVPTYSPDPYLDFRQSMEEMVEARPELMADVKSNWHVLQELLMCYLALNPKSTHKFILGAFADLLVTRMAFSDGGGGGGEE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01115 230 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 149 215 IPR006458 -
Adu06g01115 230 MobiDBLite consensus disorder prediction 30 45 - -
Adu06g01115 230 MobiDBLite consensus disorder prediction 30 61 - -
Adu06g01115 230 ProSiteProfiles OVATE domain profile. 151 216 IPR006458 -
Adu06g01115 230 MobiDBLite consensus disorder prediction 102 121 - -
Adu06g01115 230 Pfam Transcriptional repressor, ovate 155 216 IPR006458 -
Adu06g01115 230 PANTHER TRANSCRIPTION REPRESSOR OFP12 11 220 - -
Adu06g01115 230 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 220 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01115 Adu-Chr6 14796462 14797638 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Adu06g01115 Ovate 3.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01115 - - gmx:102660213 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01115 06 14796462 14797638 Adu06g01115 06 14796462 14797638 ECH
Adu06g01115 06 14796462 14797638 Adu02g00664 02 9190682 9191446 PCT