Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01099 ATGGCTCCCAAACGCAAAAGTTTGAAGCGCAAACTCGAACATGATTTGGTTGCACTTGGATCAGATCGGGCCAAGTCTCCACAGCCGCTTCAAAATTCTCCTCCTCCTTCTTCTCCTGATGTCTCCGCTGTCATTCTTTCACATGTAGATCTCCTCAATTCCCCTTCATCCACATATGTGACTGACCGTGCTGCTCTTTTTAGATCGCTCCATGCTCTCTCGGATTTGGCCCAGAACGAGGAAATGGTTGATGATATGGTCAAGTGTAGTGTTGTACCCGCTGTGGTGAAGCATTTGGAGGTGCCGATTGACGATGATTGTGTTTGTGGACCGTATGGTTATGAGGTGGAGAAAAAGTGTGCAATAATTCTTGGCCTTCTTGCTAATAAGCCAGAACATCAACACCTGATTGTTGATGCTGGAGCCTTGCCGTATATTGTGGACTTGTTAAAGAGGCACAAAACTAGTAGCATTATTTCTCCTGGTCTCGTTGGTCTTCTTAGGAGACTAGCTGATGCAATAACTAATCTTGCACATGAAAATACCACCATAAAGAACCTTGTTAGGATGGAAGGTGGTATCCCTCCTCTTGTTGAACTGCTTGAATTCAATGATAGAAATGTACAGAAGGCGGCTGCTGGCGCTCTGCGAACTCTTGCCTTCAAGAATGATGAGAATAAAAACCAGATTGTTGAATGCAAAGCATTACCAACTCTTGTGCTAATGCTCCGATCAGAGGATCCTACTGTACATTATGAGGCGGTTGGTGTGATAGGAAACCTTGTACACTCTTCGCCCAATATTAAGAAAGAAGTTATTCAAGCTGGGGCATTACAACCTGTCATTGGATTACTTAGTTCTAGCTGTTTGGAGAGTCAAAGAGAAGCGGCTCTTTTACTTGGTCAATTTGCTTCAACGGATACAGATTGCAAGGTTCATATTGCTCAAAGAGGGGCAATTCAGCCATTAGTTGGCATGCTTAAGTCATCAGATTCACAGCTTAAGGAAATGTCAGCTTTTGCTCTTGGGAGGTTGGCGCAGGATTCACACAATCAAGCTGGTATTGCTTATCATGGAGGTATTGAGCCTCTAATCGATCTTCTTAGCTCAAAGAATGCGTTCATCCAGCACAATGCAGCTTTTGCTCTATATGGCCTGGTGGATAATGAGGACATTATTGCAGACGTTATTAAGGCTGGTGGTTTTCACAAACTTCAGGATGGAAGTTTCAAAGCTCAACCAACTAGAGAGTGCGTAGCAAAAACCTTAACAAGATTTGAGGAGAAGATCCAGGGGCAAGTATTGAAACACTTGTCATATCTTATGCGCTTTGCGGAAAAGGGTGTTCAACGGCGTGTTGCTCTTGCTCTTGCTCATTTGTGTCCTATTGATGATTGTAGAACTATCTTCATTGACAACAATGGATTAGAATTGCTGTTGGAGCTTCTTGGATCTACAAACCTTAAACAGACAGGTGTTGCTTCGCTGGCACTTCACAAGTTGGCTACCAGAGCCATTTCTGTCCCTCTTGGTGATGTTGCACCTTCATCGCCAACTCCCCAGGAGTTTTTAGGCAAGCACTGTGTTAACAATCCAAAGCTCTCTGATGTCACATTCTTGGTTGAAGGCAAAAGATTCTATGCTCATCGAGTTTGCTTAGTCAAGTCAGATATATTTCGAGCAATGTTTGATGGTGGTTACAGGGAAAGGGAAGCCAAAGATATAGAGATTCCAAACATCAAATGGGATGTATTTGAATTGATGATGAGATATATATACACTGGAACAGCAGATGTTAGTCTGGATATCGCTCAGGATCTTCTCAAAGCCGCTGATCAGTATCTTCTTGAGGGTCTTAAGCGTCTCTGCGAAAATACAATTTCGCAGGATATTACTGCAGAAAATGTTGCACTAATGTACCAGATGTCAGATACTTTTAATGCAACTTCACTAAAACATGCATGCATAATGTTTGTGTTGGACCAATTTGATAAGCTGAGTTCCAAACCATGGTATGGCTACCTGGTTTGCAGCATTGTTCCAGACATACGTAAATTCTTCTCAACTTTACTCGGGAAGTCTAGTTCTGCTGATTCATGA 2100 0.4271 MAPKRKSLKRKLEHDLVALGSDRAKSPQPLQNSPPPSSPDVSAVILSHVDLLNSPSSTYVTDRAALFRSLHALSDLAQNEEMVDDMVKCSVVPAVVKHLEVPIDDDCVCGPYGYEVEKKCAIILGLLANKPEHQHLIVDAGALPYIVDLLKRHKTSSIISPGLVGLLRRLADAITNLAHENTTIKNLVRMEGGIPPLVELLEFNDRNVQKAAAGALRTLAFKNDENKNQIVECKALPTLVLMLRSEDPTVHYEAVGVIGNLVHSSPNIKKEVIQAGALQPVIGLLSSSCLESQREAALLLGQFASTDTDCKVHIAQRGAIQPLVGMLKSSDSQLKEMSAFALGRLAQDSHNQAGIAYHGGIEPLIDLLSSKNAFIQHNAAFALYGLVDNEDIIADVIKAGGFHKLQDGSFKAQPTRECVAKTLTRFEEKIQGQVLKHLSYLMRFAEKGVQRRVALALAHLCPIDDCRTIFIDNNGLELLLELLGSTNLKQTGVASLALHKLATRAISVPLGDVAPSSPTPQEFLGKHCVNNPKLSDVTFLVEGKRFYAHRVCLVKSDIFRAMFDGGYREREAKDIEIPNIKWDVFELMMRYIYTGTADVSLDIAQDLLKAADQYLLEGLKRLCENTISQDITAENVALMYQMSDTFNATSLKHACIMFVLDQFDKLSSKPWYGYLVCSIVPDIRKFFSTLLGKSSSADS 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01099 699 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 359 401 IPR000225 GO:0005515
Adu06g01099 699 SUPERFAMILY POZ domain 527 628 IPR011333 -
Adu06g01099 699 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 318 360 IPR000225 GO:0005515
Adu06g01099 699 MobiDBLite consensus disorder prediction 1 20 - -
Adu06g01099 699 Pfam Armadillo/beta-catenin-like repeat 223 262 IPR000225 GO:0005515
Adu06g01099 699 Pfam Armadillo/beta-catenin-like repeat 266 301 IPR000225 GO:0005515
Adu06g01099 699 Pfam Armadillo/beta-catenin-like repeat 187 220 IPR000225 GO:0005515
Adu06g01099 699 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 4 698 IPR044282 -
Adu06g01099 699 ProSiteProfiles BTB domain profile. 535 601 IPR000210 GO:0005515
Adu06g01099 699 SUPERFAMILY ARM repeat 169 502 IPR016024 -
Adu06g01099 699 SMART BTB_4 535 631 IPR000210 GO:0005515
Adu06g01099 699 SUPERFAMILY ARM repeat 65 201 IPR016024 -
Adu06g01099 699 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 192 227 IPR000225 GO:0005515
Adu06g01099 699 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 141 171 IPR000225 GO:0005515
Adu06g01099 699 Pfam BTB/POZ domain 530 629 IPR000210 GO:0005515
Adu06g01099 699 Gene3D - 41 407 IPR011989 -
Adu06g01099 699 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN 4 698 - -
Adu06g01099 699 Gene3D - 409 509 IPR011989 -
Adu06g01099 699 Gene3D Potassium Channel Kv1.1; Chain A 515 660 IPR011333 -
Adu06g01099 699 SMART arm_5 307 347 IPR000225 GO:0005515
Adu06g01099 699 SMART arm_5 348 388 IPR000225 GO:0005515
Adu06g01099 699 SMART arm_5 223 263 IPR000225 GO:0005515
Adu06g01099 699 SMART arm_5 265 305 IPR000225 GO:0005515
Adu06g01099 699 SMART arm_5 181 221 IPR000225 GO:0005515
Adu06g01099 699 SMART arm_5 79 129 IPR000225 GO:0005515
Adu06g01099 699 SMART arm_5 130 179 IPR000225 GO:0005515
Adu06g01099 699 SMART arm_5 463 503 IPR000225 GO:0005515
Adu06g01099 699 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 234 276 IPR000225 GO:0005515
Adu06g01099 699 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01099 Adu-Chr6 14368477 14373324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01099 285 496 U-box Gene Family AT2G23140 30.631 1.84e-14 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Adu06g01099 BTB 2.7e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01099 - - sind:105165291 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01099 06 14368477 14373324 Adu06g01099 06 14368477 14373324 ECH