Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01092 ATGCCAAGCTGTAGCAGGGTTCAAAGCATGCTGCAGGCTGCGGTTCAATCACTTCACTGGACTTACACCATCTTTTGGCAACTCTCTCCACAACAAAGAGTTCTAAGGTGGAGTGATGGATTCTACAATGGAGAAATTAAGGTTAGGAGGACAGTAGAAGCAATAGAAGCTAACAAGAGTAATAGTAATAATGAGGAGGCGTCTCTCCAGAGAAGCAACCAGCTTAGAGACCTCTATGACTTACTATTGTCTGATCGCCAGGGAGACCTCATCTTTGCTGCTGATCCCCCGGCAACTCCGCGTCCTTGTACCGCCTTGTCGCCGGAGGATCTTAGCGAATCCGAATGGTACTATTTGATGTGTGTCTCCTTCTCCTTTGCTCCTGGTGTAGGGTTGCCGGGGAAGGCATATGCGAGGAGGCAGCATGTTTGGCTCCAAGGTGCAAACGAAGCGGACACCAAGACATTTTCAAGAGCAATTCTTGCCAAGAGTGCTCATGTGAAGACAGTGGTGTGCATTCCAATGTTGGATGGCGTCGTTGAACTCGGCACAACTGATAAGGTAAAAGAAGATATCAACTTAATCAAACATATAAAGAGCTTCTTCATAGGAGATCACCACCGTCCCCAACCAAAGCATGCCCTATCTGAAAACTCTGCCTCCAATCCCATTACAGAAGAAGCTCAATTATTATTGGATTCAGAAACAGCAACCCTCCCACAAAGTAAGCTTAAGGAGCTGGTCATGACAGAGGACAGTAGCCGAGCCGGATCGCCGGATGATGGCTCCAATCGGCTGAACTCAGCCGGGTTGGAGCTGCTTCCACCAGAATCAGCAGCTTCACTAGAACTACTACATGGTGATGAGTATGATAATAACTCAGAGGCTGAGACATCTCACCTATGTACGGAGCAAGAAGGCCACACACACTACTCTAAAACGGTGTCCACCATCCTAGAAGGCAGCTCCGGCCACCGGCCGGATGCTGTTTGTGGCTTATTGTCCTTCCAATCAGCTTTTGCCACGTGGAGCAGCCGTGCTTATAACTGCCACCAGGTGACGGTGGTTGAAAACCCCCAACGGCTCCTCAAGAACATATTGTTTAGGGTTCCATACTTGCATCGCAAGCAAAACCGCCACAATAGTAATAATAATTCAGCAAAAACCCTAGAACAATTGGAAAGAACGATGATGCCTTCTCCACAAGATGACCTAATCAGCAGCCACGTGGCAGCAGAGCGGCGGCGTCGCGAAAAGCTGAACGAGAAGTTCATCACGTTAAGGTCGTTGGTACCATATGTGACGAAAATGGACAAGGCTTCTATATTGGGAGACACAATTGAGTACGTGAAACAGTTGCACGAGAAGGTGAAGAAGCTGGAGGAGGAAGATAAACGGCGGAGAAGTGGAAAGAAGAGGAAGGAGAGGGCGGTGGAGGTTTCGGTGATAGAGGGTGAGATTTTGTTGGAGGTGGAGTGTATGAATAGGGAAGGGTTGTTGCTTGATTTGATGAGAGCGTTGAAGGAGGTGGGAATAGAGGTGAGAGGGGTAAAATCGTCATTTAAGGGTGATGATGAAAGGGTGTTTGTGGTGGAGTTAAGAGGCAAGGTGAAAGAAAATGGAAAAAGGAATAATAATAATAATAAGAAGAAGAAGATTAGCATCATGGAAGTGAAGAAGGTCCTTCGTAACATTATAAACCCTCATCATCCACTATAA 1719 0.4706 MPSCSRVQSMLQAAVQSLHWTYTIFWQLSPQQRVLRWSDGFYNGEIKVRRTVEAIEANKSNSNNEEASLQRSNQLRDLYDLLLSDRQGDLIFAADPPATPRPCTALSPEDLSESEWYYLMCVSFSFAPGVGLPGKAYARRQHVWLQGANEADTKTFSRAILAKSAHVKTVVCIPMLDGVVELGTTDKVKEDINLIKHIKSFFIGDHHRPQPKHALSENSASNPITEEAQLLLDSETATLPQSKLKELVMTEDSSRAGSPDDGSNRLNSAGLELLPPESAASLELLHGDEYDNNSEAETSHLCTEQEGHTHYSKTVSTILEGSSGHRPDAVCGLLSFQSAFATWSSRAYNCHQVTVVENPQRLLKNILFRVPYLHRKQNRHNSNNNSAKTLEQLERTMMPSPQDDLISSHVAAERRRREKLNEKFITLRSLVPYVTKMDKASILGDTIEYVKQLHEKVKKLEEEDKRRRSGKKRKERAVEVSVIEGEILLEVECMNREGLLLDLMRALKEVGIEVRGVKSSFKGDDERVFVVELRGKVKENGKRNNNNNKKKKISIMEVKKVLRNIINPHHPL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01092 572 MobiDBLite consensus disorder prediction 249 270 - -
Adu06g01092 572 Pfam Helix-loop-helix DNA-binding domain 408 454 IPR011598 GO:0046983
Adu06g01092 572 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 202 IPR025610 -
Adu06g01092 572 Coils Coil 443 463 - -
Adu06g01092 572 Coils Coil 52 72 - -
Adu06g01092 572 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 404 453 IPR011598 GO:0046983
Adu06g01092 572 PANTHER TRANSCRIPTION FACTOR TT8 6 566 - -
Adu06g01092 572 ProSiteProfiles ACT domain profile. 488 566 IPR002912 -
Adu06g01092 572 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 403 465 IPR036638 GO:0046983
Adu06g01092 572 Gene3D - 406 477 IPR036638 GO:0046983
Adu06g01092 572 SMART finulus 410 459 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01092 Adu-Chr6 14297753 14304237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01092 7 566 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 45.184 6.17e-149 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu06g01092 bHLH-MYC_N 5.1e-50 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01092 - - aprc:113862120 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01092 06 14297753 14304237 Adu06g01092 06 14297753 14304237 ECH