Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01079 ATGGAGAATGATGGCAAAGAGTCGTATAAGGATGGTGATCAATCTGAAAATTTAAGTGTTGAGTATGAGTGCAGTTCCGATGAAAGTGATGATATGGTGGATGTAAGTATAGATGAAGCAGAGGCAGATATAATTAATGCTGGTGGTTTGGAAAAGTTGATAACTGATTTGACCATCGAAGACATATGGGGACTGGTGTTTGATACAGAATCTCAAGTTTGTGAATTTTATGCCAAGTATGCCAAGTGCTATGGATTTGTGTCCCGAAAAGACTTGAAGACGGTGGATGCTAATGGCAACATTAATACAagacagttgCCTCCGCGTCCAGCACCCACAATCCTCTCCTCTCTTCGAATTCTAACAACAGCCACCACCCACCATCCCACTTCAGAGCTCGAACTCATTGCCGAATACTCAAATGCTGAAGATGAACCAATGACCGAAGAAATCAGTCTAAGTGAAGAGACATTAAAAGCTAAGACCAACACATCAGGAATAGAAGCGACCGAAGTTCCAGATGCAGCCACAACCAAGATACCAGGATTGCCACAATATCCTATGCATCATTATCCAGTGGTCCTTCCTTATCAACCTTATGGTGGAGTCCTCCCTATTCCTTTTCATCCTGTTCCAAATGGCATGGCGTACTTCAACCAATATCCTTCTACTGCCGGAATTACATCATATCCTCAGTTTTCGCATGTCTCGTCGTATTCTAGTGGACCCCGTGATAGCAATACATGTCTTGTGGTTTGTGAGAGATCTCTATCTGGTTCTGGGAGTGGCCCTAATGCAGTTGCTGCTGCTCAGTTTGTAAGGGCTGAAATGCTTCCTAGCGGCTATTTGATTCGACCATGTGAAGGTGGAGGGTCAATTATTCACATCGTAGACCACCTAAATCTTGAGGTGGCTGCTCTTGTTCCTAAAGGGGAGCTTGATGGTGAAATGGGGGATGCACACATGGCAATGCAGGCTAGGTATGAGTTAAAACCCAGTAATTGCACTGGAATCAGCATTGTTCTGAGGGACTTGAGATTGATTTGGATTATTGCATCTTCTGCCATGAATGTTTGTCCTTTTGGCTTTTATTTACAGATTTTGGGAAGCCAGGTACTTGTCAAGGTTGTGAAGAACAAGCTTGCCCCTCCATTTAAAACTGCTGAGTTTGAGCTTCAATTTGGCGAGGGTATAAATAGAGAATGTGAGATCATAGACTTGAGTGTAAAACACAAAATCATCCTAAAGGCCGGTGCTATGTATTACTTCAATGATAAGAATTTCCGTGGTAGGGATGCTTTTAAGAGTTTCCTGGCCGAGAATCATAGTGCATTTGAAGAACTTCAAATGAAACACAGGGAGAAGCTTCTTGATGATACCGAGGTGGAAAAGGTACAAGATTCAGATGTGACTAGTGATGTCAAAGAAGAAATTACAACAACACTCGAGTCTACCGATGAAGAATCCTCAGCTGCTGTCGAAGCTTGA 1488 0.4254 MENDGKESYKDGDQSENLSVEYECSSDESDDMVDVSIDEAEADIINAGGLEKLITDLTIEDIWGLVFDTESQVCEFYAKYAKCYGFVSRKDLKTVDANGNINTRQLPPRPAPTILSSLRILTTATTHHPTSELELIAEYSNAEDEPMTEEISLSEETLKAKTNTSGIEATEVPDAATTKIPGLPQYPMHHYPVVLPYQPYGGVLPIPFHPVPNGMAYFNQYPSTAGITSYPQFSHVSSYSSGPRDSNTCLVVCERSLSGSGSGPNAVAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEVAALVPKGELDGEMGDAHMAMQARYELKPSNCTGISIVLRDLRLIWIIASSAMNVCPFGFYLQILGSQVLVKVVKNKLAPPFKTAEFELQFGEGINRECEIIDLSVKHKIILKAGAMYYFNDKNFRGRDAFKSFLAENHSAFEELQMKHREKLLDDTEVEKVQDSDVTSDVKEEITTTLESTDEESSAAVEA 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01079 495 PANTHER RECA 303 348 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu06g01079 495 MobiDBLite consensus disorder prediction 462 495 - -
Adu06g01079 495 MobiDBLite consensus disorder prediction 1 30 - -
Adu06g01079 495 SUPERFAMILY Bet v1-like 246 303 - -
Adu06g01079 495 Gene3D - 294 399 IPR027417 -
Adu06g01079 495 Pfam START domain 245 303 IPR002913 GO:0008289
Adu06g01079 495 SUPERFAMILY RecA protein, C-terminal domain 400 454 IPR023400 -
Adu06g01079 495 PANTHER RECA 352 485 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu06g01079 495 ProSiteProfiles RecA family profile 2. 362 403 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Adu06g01079 495 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 352 485 - -
Adu06g01079 495 Pfam recA bacterial DNA recombination protein 366 399 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu06g01079 495 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 303 348 - -
Adu06g01079 495 MobiDBLite consensus disorder prediction 462 482 - -
Adu06g01079 495 MobiDBLite consensus disorder prediction 1 17 - -
Adu06g01079 495 PRINTS RecA protein signature 32 61 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu06g01079 495 PRINTS RecA protein signature 290 318 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu06g01079 495 PRINTS RecA protein signature 427 444 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu06g01079 495 PRINTS RecA protein signature 374 403 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu06g01079 495 Gene3D - 400 457 - -
Adu06g01079 495 ProSiteProfiles START domain profile. 251 310 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01079 Adu-Chr6 14171727 14177491 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01079 247 303 Homeobox Transcription Factor Family AT5G60690 84.211 8.36e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01079 K03553 - adu:107492975 373.629