Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01073 atgttcaacgcaccctgtcacggcacggctaatcatctgtcggttctcaatcagTGTCGTGGTGCCGAAGCGGAGCAAGCTTCGTGGTTTGAGATCCGCACGCCTTCTCCAGAGGCCTTCTTCCAAGATACTTCAAGCATAACTGCATTAGTGCATAACAACATCTCCAGCTTCGTAAGGCAGCTCAACACTTACGGTTTTAGAAAGATTGATCCAGATAAATGGGAGTTTGCGAACGAAGGGTTTGTGAGAGGGCACAGGCACCTGTTAACAAGGCGGTTCGGATTGGATGAGGAGATCGACCGGTTGAGGCGTGACAAGCAGGTTTTGATGATGGAGCTTGTGAGGCTAAGACAGCAGCAACAAACCACAAGATCGTATCTTCAGGCAATGGAGCAGAGGCTGAAAGGTACTGAGATCAAGCAGTAG 429 0.4312 MFNAPCHGTANHLSVLNQCRGAEAEQASWFEIRTPSPEAFFQDTSSITALVHNNISSFVRQLNTYGFRKIDPDKWEFANEGFVRGHRHLLTRRFGLDEEIDRLRRDKQVLMMELVRLRQQQQTTRSYLQAMEQRLKGTEIKQ 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01073 142 Gene3D - 25 94 IPR036388 -
Adu06g01073 142 Coils Coil 100 120 - -
Adu06g01073 142 Pfam HSF-type DNA-binding 48 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g01073 142 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-7A 51 142 - -
Adu06g01073 142 SMART hsfneu3 26 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g01073 142 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 51 142 IPR027725 -
Adu06g01073 142 SUPERFAMILY "Winged helix" DNA-binding domain 49 91 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01073 Adu-Chr6 13672198 13674195 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01073 37 142 HSF AT3G22830 52.113 3.78e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Adu06g01073 HSF_DNA-bind 1.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01073 K09419 - gmx:100794264 141.739