Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01046 ATGGCTACTATTGCTCTCAGGAATTCAAGTTCTAGGCGACTCTTCCCATTTTCTTCTCAAATCTTCTCTTCTTGTTGCAGACCCTTCCCCCCTCTCTCTGAATCCCCCTTTCCAAATGACAAGCTCTCTCCTTCTTCATCTTCTTCTTCTTCCAATCCTTGGTGGAGATCCATGGCCACCTTCACCAGAACAAAACCCCATGTTAATGTTGGAACTATTGGGCACGTTGATCATGGGAAGACTACACTCACCGCAGCAATTACCAAGGTTTTAGCCGATGAGGGAAAAGCTAAGGCTATAGCCTTTGATGAAATTGATAAGGCTCCTGAAGAGAAGAAGAGAGGAATTACAATTGCAACGGCACACGTTGAGTATGAGACTGCTAAACGACACTATGCACATGTTGACTGCCCTGGACATGCTGATTATGTCAAAAATATGATTACAGGAGCTGCACAAATGGATGGTGGAATACTTGTTGTATCTGCTCCTGATGGACCAATGCCCCAAACCAAGGAGCACATTCTTCTTGCTCGCCAAGTTGGTGTGCCTTCTCTGGTGTGCTTTTTGAATAAAGTTGATGCTGTCGATGATCCAGAGTTGTTAGAACTTGTAGAAATGGAGCTCCGGGAGCTTCTAAGCTTCTACAAGTTCCCTGGAGATGAAATCCCCATCATCAGAGGCTCAGCATTGTCTGCTTTACAGGGTACAAATGACGAAATTGGAAGAAAGGCCATTCTAAAATTAATGGATGCTGTAGATGAATACATTCCTGACCCAGTTCGCCAACTTGACAAGCCTTTCCTTATGCCCATTGAAGATGTTTTTTCAATTCAGGGACGAGGAACAGTTGCCACCGGCCGTGTTGAGCAAGGAATCATAAAAGTTGGTGATGAAGTGGAGGTTTTGGGTCTAATGCAGGGTGGCCCTCTTAAAACAACAGTTACTGGAGTTGAGATGTTCAAGAAGATTTTAGACCAAGGACAGGCTGGTGACAATGTTGGTCTTCTTCTTCGAGGTCTGAAGCGTGAGGACATTCAACGTGGTCAGGTTATTGCCAAGCCTGGTTCTGTAAAAACATACAAAAAGTTTGAGGCGGAGATATATGTACTCACAAAAGATGAGGGTGGGCGACATACTGCTTTCTTCTCTAACTACAGACCTCAGTTTTACTTGAGAACTGCTGATGTCACTGGAAAAGTAGAATTGCCCGAAAATGTCAAGATGGTTATGCCTGGAGACAACGTGACTGCTGTGTTCGAATTGATTTCAGCTGTTCCACTTGAACAAGGACAAAGATTTGCTTTGAGAGAAGGCGGCAGAACAGTTGGTGCAGGTGTGGTGTCAAAAGTACTGACTTAA 1362 0.4435 MATIALRNSSSRRLFPFSSQIFSSCCRPFPPLSESPFPNDKLSPSSSSSSSNPWWRSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLADEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGSALSALQGTNDEIGRKAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGIIKVGDEVEVLGLMQGGPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGSVKTYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADVTGKVELPENVKMVMPGDNVTAVFELISAVPLEQGQRFALREGGRTVGAGVVSKVLT 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01046 453 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Adu06g01046 453 Pfam Elongation factor Tu domain 2 282 352 IPR004161 GO:0005525
Adu06g01046 453 Gene3D Translation factors 397 452 - -
Adu06g01046 453 TIGRFAM EF-Tu: translation elongation factor Tu 57 452 IPR004541 GO:0003746|GO:0005525|GO:0006414
Adu06g01046 453 Hamap Elongation factor Tu [tuf]. 56 453 IPR004541 GO:0003746|GO:0005525|GO:0006414
Adu06g01046 453 PRINTS GTP-binding elongation factor signature 69 82 IPR000795 GO:0003924|GO:0005525
Adu06g01046 453 PRINTS GTP-binding elongation factor signature 113 121 IPR000795 GO:0003924|GO:0005525
Adu06g01046 453 PRINTS GTP-binding elongation factor signature 133 143 IPR000795 GO:0003924|GO:0005525
Adu06g01046 453 PRINTS GTP-binding elongation factor signature 149 160 IPR000795 GO:0003924|GO:0005525
Adu06g01046 453 PRINTS GTP-binding elongation factor signature 186 195 IPR000795 GO:0003924|GO:0005525
Adu06g01046 453 PANTHER ELONGATION FACTOR TU 7 452 - -
Adu06g01046 453 Gene3D - 57 260 IPR027417 -
Adu06g01046 453 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 65 261 IPR000795 GO:0003924|GO:0005525
Adu06g01046 453 PANTHER ELONGATION FACTOR TU-RELATED 7 452 - -
Adu06g01046 453 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 106 121 IPR031157 -
Adu06g01046 453 Gene3D Translation factors 263 393 - -
Adu06g01046 453 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 362 452 IPR009001 -
Adu06g01046 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 283 IPR027417 -
Adu06g01046 453 SUPERFAMILY Translation proteins 262 358 IPR009000 -
Adu06g01046 453 CDD EF_Tu 66 260 IPR041709 -
Adu06g01046 453 CDD EFTU_II 268 356 IPR033720 -
Adu06g01046 453 TIGRFAM small_GTP: small GTP-binding protein domain 68 204 IPR005225 GO:0005525
Adu06g01046 453 Pfam Elongation factor Tu GTP binding domain 65 258 IPR000795 GO:0003924|GO:0005525
Adu06g01046 453 Pfam Elongation factor Tu C-terminal domain 357 451 IPR004160 -
Adu06g01046 453 CDD EFTU_III 359 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01046 Adu-Chr6 13125986 13130211 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01046 63 451 Eukaryotic Initiation Factors Gene Family AT5G60390 30.594 4.44e-45 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01046 K02358 - gmx:100791600 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01046 06 13125986 13130211 Adu06g01046 06 13125986 13130211 ECH