Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01005 ATGCCTGGACTTATAACTGATTTTTTGATATCTCTCGACGACCAGTTTTCGTACTTTGTGAACTGGCTTCATGGTGATATAAGGCAGTATAATATTGAGGACCCCAAAAATCCTGTACTCAAAGGCCAAGTCTGGGTAGGGGGACTACTTTGGAAAGGAAGTTCCATAGTCGCAATAGCAGAAGATGAATATCGTGTAGGCGATGCAGAGCATCTTTATGCCTCTTTTGAAGAAGAAACTGGAGTTTTTCAGTATCCAACGACAATAACATCAAATGACATTGAGGAAATTCAGAAATTTCTAGACAAAGTTGTTGGGTCAAGCTGTGAGGGATTAATCATTAAAACTTTAGATGAAGATTCTACATATGAACCTTCCAATCGGTTAAACAATTGGCTAAAACTGAAGAAAGATTATCTGGATAAATTTGGTACCTATAGCTGCATTCCACGGACGAGGAAAATGTACAGGCAAAGACGGTGGCGATCTTCGGAGTTGATAAAGAGTAGTGTGGAGCAAATTCTAGAGCAATATAAGCCAGTTATTTTGGCTTTTCTTACCTTCTCCAAGTTGACCCTTAGCACAGTGGCTCCACAATTTACCGCTCATTTTATGCTACAGCAACTCGATTACTGTGTCAAACCTGGGAGATCAATGATCGATCTTTTCCAAGTTTGCAATAACAGGAGATCACAAGAAATTATTGAAGAGGATAAGAAAGTTTCTTGTGTTGAAGAGTTGCTTGTGAACCAATTGCTAAAGTTGAATACTATGAGATTGAAAGTGAAGTAG 792 0.3876 MPGLITDFLISLDDQFSYFVNWLHGDIRQYNIEDPKNPVLKGQVWVGGLLWKGSSIVAIAEDEYRVGDAEHLYASFEEETGVFQYPTTITSNDIEEIQKFLDKVVGSSCEGLIIKTLDEDSTYEPSNRLNNWLKLKKDYLDKFGTYSCIPRTRKMYRQRRWRSSELIKSSVEQILEQYKPVILAFLTFSKLTLSTVAPQFTAHFMLQQLDYCVKPGRSMIDLFQVCNNRRSQEIIEEDKKVSCVEELLVNQLLKLNTMRLKVK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01005 263 PANTHER METHANETHIOL OXIDASE 1 63 IPR008826 GO:0008430
Adu06g01005 263 ProSitePatterns ATP-dependent DNA ligase signature 2. 110 136 IPR016059 GO:0003909
Adu06g01005 263 Gene3D - 67 144 - -
Adu06g01005 263 ProSiteProfiles ATP-dependent DNA ligase family profile. 72 144 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Adu06g01005 263 Pfam 56kDa selenium binding protein (SBP56) 1 55 IPR008826 GO:0008430
Adu06g01005 263 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 32 137 - -
Adu06g01005 263 PANTHER SELENIUM-BINDING PROTEIN 1 1 63 - -
Adu06g01005 263 Pfam ATP dependent DNA ligase domain 71 136 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01005 Adu-Chr6 12513491 12517278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01005 70 144 Core DNA Replication Machinery Family AT1G08130 69.333 1.94e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01005 K10747 K17285 ahf:112716277 238.424