Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01001 ATGTTGTGCTGTGGAGGTGCAGAGGAGGAGAGCAGTGGCCCGCCTGCCAACCAAGCCACCACTGCACCGCCTCGAGGGGGAAACACATACGGTGGAGGAGGCAATGACAGAGGAGAGCCAAGGGGCAATGCTGCCAAGACTGGTGCTCCACAGAAAGTGCTGCCAATTGAGATTCCATCTATGCCATTGGATGAGTTAAATAGGTTAACAGGAAACTTTGGTTCCAAGTCTTTCATTGGAGAAGGTTCCTATGGACGGGTTTACTATGCAAAATTGGATGATGGAACAGATGCTGCAATCAAGAAGCTGGATACCAGTTCTTCAACAGAATCTGACACTGATTTCACAGCTCAGTTATCAGTTGTTTCAAGACTGAAGCATGATAATTTTGTGGAGATGATTGGATACTGTCTAGAGGCAAATAACAAAATCTTGATTTATCAATATGCAAGTCTTGGTTCTTTGCATGACATATTACACGGAAGGAAGGGTGTACAAGGGGCTGAACCAGGTCCAGTTTTAAGCTGGAATCAGAGAGCGAAAATCGCGTTTGGTGCGGCAAAAGGACTTGAGTATCTTCATGAGAAGTGTCAGCCTTCTATAGTTCACCGTGATGTTAGATCCAGCAATGTACTACTCTTCAATGACTATGACGCCAAGATTGCAGATTTCAGCTTGACAAACCAGTCTTCTGACACCGCGGCTCGCCTACATTCAACAAGAGTGTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCAATGACTGGACAGATAACACAGAAGAGTGATGTTTACAGTTTCGGAGTCGTGCTTTTAGAGCTCTTAACAGGAAGAAAGCCAGTAGATCACACAATGCCCAAAGGGCAACAAAGTCTTGTAACTTGGGCAACTCCAAGGTTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAACGATGACTATCCCCCAAAGGCAGTTGCTAAGTTGGCAGCGGTTGCAGCACTTTGTGTTCAGTATGAAGCAGATTTCAGGCCAAACATGACTATTGTAGTCAAAGCTCTCCAGCCACTTCTGAATTCAAAACCTGGTCCTGAAGCAAATGCTTGA 1098 0.4536 MLCCGGAEEESSGPPANQATTAPPRGGNTYGGGGNDRGEPRGNAAKTGAPQKVLPIEIPSMPLDELNRLTGNFGSKSFIGEGSYGRVYYAKLDDGTDAAIKKLDTSSSTESDTDFTAQLSVVSRLKHDNFVEMIGYCLEANNKILIYQYASLGSLHDILHGRKGVQGAEPGPVLSWNQRAKIAFGAAKGLEYLHEKCQPSIVHRDVRSSNVLLFNDYDAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNDDYPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPGPEANA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01001 365 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 362 - -
Adu06g01001 365 Gene3D Phosphorylase Kinase; domain 1 41 149 - -
Adu06g01001 365 SMART tyrkin_6 73 351 IPR020635 GO:0004713|GO:0006468
Adu06g01001 365 Gene3D Transferase(Phosphotransferase) domain 1 151 361 - -
Adu06g01001 365 CDD STKc_IRAK 79 354 - -
Adu06g01001 365 PIRSF ILK 36 359 - -
Adu06g01001 365 Pfam Protein tyrosine and serine/threonine kinase 78 351 IPR001245 GO:0004672|GO:0006468
Adu06g01001 365 ProSiteProfiles Protein kinase domain profile. 73 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g01001 365 ProSitePatterns Tyrosine protein kinases specific active-site signature. 201 213 IPR008266 GO:0004672|GO:0006468
Adu06g01001 365 MobiDBLite consensus disorder prediction 1 51 - -
Adu06g01001 365 PANTHER OS03G0226300 PROTEIN 1 362 - -
Adu06g01001 365 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Adu06g01001 365 SUPERFAMILY Protein kinase-like (PK-like) 53 351 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01001 Adu-Chr6 12422083 12424906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01001 37 358 Receptor kinase-like Gene Family AT3G58690 43.252 4.09e-86 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Adu06g01001 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01001 - - gmx:100786291 642.884