Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00994 ATGGAGCTTGCTTTGAGCTTAGGGGAAGCACCTAAGTCCTTCACTTTGCTTGACAACACTCCCAAACTACCTAATAACAAGGATCCAGTGGGTTTCTGCATAGTACTTGGTGCTGCTGCTTCCTCCGCCGGAAAATCCTCTGAGGAAGACAGAAGAGGATCCTCAGATCCGCCAGTTCAGCTCGACCTTCTCCCTTCAACGCCGGTTCTTCGCTCCCAACACCCATCTTCACACCTTCGAATTCCATGGCTCAACGATGCACGTACGCAAAACTTTCCTTCCCTCTTTCTTTCCGTTTTCTACAGGAGAGACGTAGAAGGTGGTGAGGGCAACGACAGAGGCACCAGCGATGACGACGAGAACGGATCCACCAGGAAGAAGCTCAGGCTCTCTAAGGAACAATCTGCGTTTCTTGAAGAGAGCTTCAAAGAACACACCACCCTTAATCCTAAGCAGAAACTGGCTCTTGCGAAACAGTTAAACCTTCGTCCCCGTCAAGTTGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACCAAGTTGAAGCAAACGGAGGTGGATTGCGAGTACTTGAAGAGGTGCTGTGACACCTTAACGGAAGAGAATCGGAGGTTGCAGAAGGAGCTTCAAGAGCTGAGGGCATTAAAGACTTCTCAACCCTTCTACATGCAGCTTCCGGCCACCACTCTCACAATGTGCCCTTCTTGTGAAAGGGTCGCCACCAACACCGCCGCTAATAACAATGACGCTTCTCAGATTGCTTCCGCTTTGTCTCTTAGTAACAAGCCCAGAATCTTGCCATTTCCTAATACTCAGGCCCATCCTCCTCCGGCCCAAAAGGCCCATCAATGA 849 0.4994 MELALSLGEAPKSFTLLDNTPKLPNNKDPVGFCIVLGAAASSAGKSSEEDRRGSSDPPVQLDLLPSTPVLRSQHPSSHLRIPWLNDARTQNFPSLFLSVFYRRDVEGGEGNDRGTSDDDENGSTRKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCDTLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATNTAANNNDASQIASALSLSNKPRILPFPNTQAHPPPAQKAHQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00994 282 ProSiteProfiles 'Homeobox' domain profile. 121 181 IPR001356 GO:0003677
Adu06g00994 282 PANTHER - 105 251 - -
Adu06g00994 282 MobiDBLite consensus disorder prediction 107 130 - -
Adu06g00994 282 SMART halz 181 224 IPR003106 GO:0006355|GO:0043565
Adu06g00994 282 SMART HOX_1 123 185 IPR001356 GO:0003677
Adu06g00994 282 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 105 251 - -
Adu06g00994 282 Coils Coil 187 217 - -
Adu06g00994 282 MobiDBLite consensus disorder prediction 263 282 - -
Adu06g00994 282 CDD homeodomain 125 182 IPR001356 GO:0003677
Adu06g00994 282 Pfam Homeobox associated leucine zipper 181 215 IPR003106 GO:0006355|GO:0043565
Adu06g00994 282 SUPERFAMILY Homeodomain-like 113 182 IPR009057 -
Adu06g00994 282 ProSitePatterns 'Homeobox' domain signature. 156 179 IPR017970 GO:0000981|GO:0006355
Adu06g00994 282 Gene3D - 129 179 - -
Adu06g00994 282 Pfam Homeodomain 125 179 IPR001356 GO:0003677
Adu06g00994 282 MobiDBLite consensus disorder prediction 43 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00994 Adu-Chr6 12340846 12342053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00994 103 272 Homeobox Transcription Factor Family AT4G37790 59.574 7.62e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu06g00994 Homeodomain 2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00994 K09338 - gmx:100776113 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00994 06 12340846 12342053 Adu06g00994 06 12340846 12342053 ECH