Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00993 ATGTTTTGTTCCATAATTTTGTCAGTGCTAATAACAACACTTGTTCATGAATCAAATGCTCAATTGAGTTCAAGCTTCTACAGCAGCACATGCCCCAACGTGTCTTCCATTGTGAGAAGTGTGGTTCAGCAAGCTTTGCAATCTGATCCTCGCATTGGCGCAAGCCTAACTCGCCTTCATTTCCATGATTGCTTTGTTAATgggtgtgatgcatcagttttgttggaccaaggtggcaacataacactgagcgagaagggtgcagttccaaacaataattcagctcgtgggtttgatgtagttgataaaatcaagagtgctgttgaaaattcatgccctggtgttgtgtcttgtgctgacattcttgctcttgcggctgaaGCTTCTGTCTCTCTGGGAGGAGGTCCTTCATGGAACGTTGTTCTTGGGAGAAGGGATGGTGTAATTGCAAACCAATCAGGAGCGAATAATTCGATTCCAACTCCATTTGAAAGCTTAGCGAACATCACAGCAAAATTTGCTGCTGTTGGACTCAATATAACTGATCTCGTTGCATTATCCAGTGCACACACATTCGGGCGAGCACAATGTAGATTTTTCAACCAGAGACTGTTCAACTGGAGCGGCACAGGGAGCCCTGATCCCACTCTGAGCCCGTCGTATGTGGCGAGCCTTCAGCAGAGGTGTCCGCAGAATGGAAGCAGTGGGACCACACTCAACAACCTGGACCCTTCATCTCCGGACACCTTCGACAACAACTACTTCTCGAACCTCATCAACAACCGTGGCCTCCTCCAGACGGATCAGGAGCTCTTCTCCTCCAACAACACCGTCACCATCTCCCTTGTAAACAGCTTCGCCGGCAACCAAACCGCCTTCTTCGAAGCCTTTGTTCAGTCCATGATCAACATGGCCAACATTAGCCCTTTGACTGCACCCCAGGGTCAAATCAGATCGTACCTACACCGAAGACAATGGTCGAACCCACTCGCACCTAAGTCCAGCTCAGACCGCACTTTGCTACCTTCACGCGCCGCCCTCCCACGCGCCACTCCACCCACCCTCCCAAGCAACCTTAACCAACTTCAGCACCGAGCTTGCACTGTGATGGCGGAAGAGACTTCGGATGCTATGAACCTTGATTTGAATCTGGGTCCAGGCCCTGACCCAACCATATCAACTGATGGTCTGAACTTGGATGATTGGATTGAGGAGCCTCTTCAGAGAATCAGTGAAGCTGTGAGGCTCAGGGGGAGGCAACGGTGGAGGTGGCGGCATATCCCTATACCTCCTCCCGAAGTTCCGCTTCACCTTCCCCCGGAAGCCCCTAGGCAATTTCATATACCCCCTGAAGCAAGGAACATCTCAATGGAATTGAACCAGTTTTTGGTTAATTCTGGTCAAGGGGGTGCATTGCAGGCTGGTGAAGGCAGTGTGGCAGCTGAGGAAAGGACGGAGGTGGCACCAAAAGCTTGTGAGAACAACAATGGTGTTATGGATGATGCGGCTTTGGAGAAGAAGGATGATGATGAGAAAAGTGGTGGCACTGATGGGGACTTCTTTGATTGTAATATCTGTTTAGACCTGGCCAGGGATCCTGTTGTGACTTGCTGTGGTCATTTGTTCTGTTGGCCGTGCCTGTATCGATGGCTGCATCTGCACTCGGATGCCAAGGAGTGTCCGGTTTGTAAAGGAGAGGTGACTTTCAAGAATGTTACACCAATATATGGTCGTGGAAATAGTGTCCGCACTGCTGAGGACGATCCCACCCTGAAAGTCCCTCTGAGGCCCCCAGCCAGGCGTGTCGAGAGTCTGAGACAAACCATTCAGAGAACTGCATTTGCACTCCCTGTGGAAGAGATGATTCGTCGTCTTGGAAGCAGGATTGATCTCACTAGGGATTTACTTCACCCGCATGAACCAGACAATGCCCGTGAAACAGCAGAAAGAACTAGTTCATTGCTAAGTAGGTTTTTGACATCTCGAGGTATAAGGAGAGAGCAAAACATTGGGGCTCCTGCAGATGACGTAGTGGGTTTGTCGCATAATAATGTTAATGTTAATGTTAATGTTAATAATCATGAGGCTGGGGATAATCGCAGGGCCCAATCCCTTCTACTTAGAAGAACACAGTCACATAGGGCAACACTTTCTACCCTTTCATCAGCACTGAATTCTGCTGAAAGGCTAGTTGAGGCATATTTCCGTAGCCATCCATTAGGTAGAAACCAAGAGCAGCCTCCTCCAGTTGATGATAGAGATTCCTTTTCAAGCATCGGTGCTGTCATCAATTCAGAGAGTCAGGTGGACACTGCTGTAGAAATTGATTCCATGGTATCCTTGTCAACATCCTCTTCTAGGAGGAGAAATGATGCTTCAAGAGTGTCTGATGTGGATAGTGGAGACTCTCGCGCTCCAAGGCGCAGACGTTTGAACTGA 2439 0.4539 MFCSIILSVLITTLVHESNAQLSSSFYSSTCPNVSSIVRSVVQQALQSDPRIGASLTRLHFHDCFVNGCDASVLLDQGGNITLSEKGAVPNNNSARGFDVVDKIKSAVENSCPGVVSCADILALAAEASVSLGGGPSWNVVLGRRDGVIANQSGANNSIPTPFESLANITAKFAAVGLNITDLVALSSAHTFGRAQCRFFNQRLFNWSGTGSPDPTLSPSYVASLQQRCPQNGSSGTTLNNLDPSSPDTFDNNYFSNLINNRGLLQTDQELFSSNNTVTISLVNSFAGNQTAFFEAFVQSMINMANISPLTAPQGQIRSYLHRRQWSNPLAPKSSSDRTLLPSRAALPRATPPTLPSNLNQLQHRACTVMAEETSDAMNLDLNLGPGPDPTISTDGLNLDDWIEEPLQRISEAVRLRGRQRWRWRHIPIPPPEVPLHLPPEAPRQFHIPPEARNISMELNQFLVNSGQGGALQAGEGSVAAEERTEVAPKACENNNGVMDDAALEKKDDDEKSGGTDGDFFDCNICLDLARDPVVTCCGHLFCWPCLYRWLHLHSDAKECPVCKGEVTFKNVTPIYGRGNSVRTAEDDPTLKVPLRPPARRVESLRQTIQRTAFALPVEEMIRRLGSRIDLTRDLLHPHEPDNARETAERTSSLLSRFLTSRGIRREQNIGAPADDVVGLSHNNVNVNVNVNNHEAGDNRRAQSLLLRRTQSHRATLSTLSSALNSAERLVEAYFRSHPLGRNQEQPPPVDDRDSFSSIGAVINSESQVDTAVEIDSMVSLSTSSSRRRNDASRVSDVDSGDSRAPRRRRLN 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00993 812 SMART ring_2 523 563 IPR001841 -
Adu06g00993 812 Pfam Zinc finger, C3HC4 type (RING finger) 523 563 - -
Adu06g00993 812 CDD RING-HC_AtRMA_like 521 565 - -
Adu06g00993 812 Gene3D Peroxidase, domain 2 160 304 - -
Adu06g00993 812 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 MobiDBLite consensus disorder prediction 780 812 - -
Adu06g00993 812 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 SUPERFAMILY Heme-dependent peroxidases 21 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 Gene3D - 26 319 - -
Adu06g00993 812 Pfam Peroxidase 38 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 MobiDBLite consensus disorder prediction 493 513 - -
Adu06g00993 812 PANTHER PEROXIDASE 72-RELATED 5 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 CDD secretory_peroxidase 21 318 IPR033905 GO:0004601|GO:0042744
Adu06g00993 812 SUPERFAMILY RING/U-box 519 577 - -
Adu06g00993 812 MobiDBLite consensus disorder prediction 790 812 - -
Adu06g00993 812 ProSiteProfiles Plant heme peroxidase family profile. 21 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Adu06g00993 812 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 495 595 IPR013083 -
Adu06g00993 812 ProSiteProfiles Zinc finger RING-type profile. 523 564 IPR001841 -
Adu06g00993 812 ProSitePatterns Zinc finger RING-type signature. 538 547 IPR017907 -
Adu06g00993 812 PANTHER PEROXIDASE 5 321 - -
Adu06g00993 812 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00993 Adu-Chr6 12317835 12321994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00993 5 318 Peroxidase AT5G06720 68.471 6.22e-150 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00993 K10666 - gmx:100811099 625.935