Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00972 ATGAATGAGAACAAGATTGATTATTGCAGAGGAATGATTCAACAAAGCCAAGGAGGACTATTTGATACCATACAGTCTTGGAACATGGTTGGAGGAGGATCACGGCCGCCACTGCCGCCACAAATAGGCCCTGCTGCAACCATCATGAGCCGGTTCGAGTCACCGGCTTCTGCCTTCTATGCAGCAGAACTCTGCATGGGGTTTGCAGAATATGAACACTCTCAGGCTCAGTTCTCTAAGATGAATAACGATAATAATGATTTGGAATTCCCTTTGTATCAAAGGGACAAATTTGATCTCTCAAACACTTTGCAAGCAATGGTGAATTCTCAATTCAATACCAAAAATCAATGCTTTAGATCATCCAACAAAATCCCATGTGACAATTTTCCTGCCAGAAAGTTCCACCACCAACAGAAGTTCTTCACTGATGCCATGGCTTCACCATTTCCTAACAAAGGAAATCAAGATAATATAGTGAGCTTCAATTCTTATCAAGATAGATCTTCATCACCTTCTTCAGGAGGAAGTGTATCAGCAAACTCTGCTTCTAATGGGGTAACCATATCGAGTAAGACGCGTATAAGATGGACTCAGGATCTTCATGAGAAGTTTGTTGAATGTGTGAATCGCCTTGGTGGTGCTGATAAGGCAACACCAAAGGCTGTATTGAAGATGATGGACTCAGATGGATTAACAATCTTTCATGTCAAAAGCCATTTGCAGAAATATAGAATTGCTAAGTACATGCCTGACCCAATTCATAATGGGAAATCTGACAAAAGAATCCACATAGAGAATCTTCAACATCAACATCTTCATCTTGATATGAAGAGTGGAATTCAAATTAGAGAAGCACTTCAACAACAATTAGATGCACAAAAGCTTCTTCATGAACAACTAGAGAATCAGAGAAAGTTGCAGCTGCGAATCGAGGAACAAGGTAGGCAGTTGAAGAAAATGTTTGAAGAGCAGCAAAAAGCAACGAATGAACTTTTGAGTTGTCAGAATATAATAACCAAAGATGATACATAA 1035 0.3971 MNENKIDYCRGMIQQSQGGLFDTIQSWNMVGGGSRPPLPPQIGPAATIMSRFESPASAFYAAELCMGFAEYEHSQAQFSKMNNDNNDLEFPLYQRDKFDLSNTLQAMVNSQFNTKNQCFRSSNKIPCDNFPARKFHHQQKFFTDAMASPFPNKGNQDNIVSFNSYQDRSSSPSSGGSVSANSASNGVTISSKTRIRWTQDLHEKFVECVNRLGGADKATPKAVLKMMDSDGLTIFHVKSHLQKYRIAKYMPDPIHNGKSDKRIHIENLQHQHLHLDMKSGIQIREALQQQLDAQKLLHEQLENQRKLQLRIEEQGRQLKKMFEEQQKATNELLSCQNIITKDDT 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00972 344 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 45 342 IPR044848 GO:0003700
Adu06g00972 344 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 192 247 IPR006447 GO:0003677
Adu06g00972 344 Pfam Myb-like DNA-binding domain 196 245 IPR001005 -
Adu06g00972 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 189 249 IPR017930 -
Adu06g00972 344 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 45 342 - -
Adu06g00972 344 Coils Coil 311 331 - -
Adu06g00972 344 Pfam MYB-CC type transfactor, LHEQLE motif 281 328 IPR025756 -
Adu06g00972 344 MobiDBLite consensus disorder prediction 157 185 - -
Adu06g00972 344 SUPERFAMILY Homeodomain-like 190 246 IPR009057 -
Adu06g00972 344 Gene3D - 191 250 - -
Adu06g00972 344 Coils Coil 284 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00972 Adu-Chr6 12074571 12076527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00972 177 325 G2-like Transcription Factor Family AT4G28610 55.034 6.60e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu06g00972 Myb_DNA-binding 6.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00972 - - gmx:100527257 354.369