Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00971 ATGTACCAATATGGTGAGTGCTGGGAACAAGATCAGAGTAGTTATGAGCCCTATTATGATGAGGTTGTTCCTGCTTCTGCTTGGAACTTTGAGCTTCCATTAACAACAGGAACAGTTGTTGATGCAGTTGAGTCTTCTAGTATTAGCAGTAGTAGTGCAGATAGCTATTCCTCTTATGAAAGATGCAACACTATTCCTTCTTCATACTCTGATCTTGCTGCTGCTAATGATGTGCTAATCTTCCATCAACACTATCCACAACAACATCATGTTCATGATGATCATGAATATGATGCTACAGATCATCATGAGAAGCCTCTTCAGATTTGCTTTCAAACAAATCAGACAGAAAAGCAAGGCTATGTGAGTGGTTCTAGCAACTGTGGTTATAGGAGAGGTCCATCATCATCATCGTCATCATCGATTAAAAGAAGAATAAGATGGACCAAAGATCTGCATGAGCCATTCATGACCGTTGTTAATAGACTCGGTGGTCCGCATAAGGCAAAGCCTAAGGCTATATTAGACATGATGAAATCTGATTTGTTGTCAATTACACACATTAAAAGTCACTTGCAGAAATATAGGTCTACAATATGGCACCACAAAGCTTCACATGAAAGATCATTTGAGGAAGGAGATAAAACAGATGTCACTCATCAACTTCAACACAAAATACAAATACAAATTGAGGAATCACAACAACTTCAACAAGAGGTCCGCAGGAGTATTCATCAACAACTGGAGATGCAACGAACTTTGCAAATGCTGATTGAACAGCAAAGAGAGCAGCTCAAGATGATGTTAGATCAACAAAAAGAAAGAAACAAAGTGGGAAAGAAATTAAATAACCCTTAA 858 0.3834 MYQYGECWEQDQSSYEPYYDEVVPASAWNFELPLTTGTVVDAVESSSISSSSADSYSSYERCNTIPSSYSDLAAANDVLIFHQHYPQQHHVHDDHEYDATDHHEKPLQICFQTNQTEKQGYVSGSSNCGYRRGPSSSSSSSIKRRIRWTKDLHEPFMTVVNRLGGPHKAKPKAILDMMKSDLLSITHIKSHLQKYRSTIWHHKASHERSFEEGDKTDVTHQLQHKIQIQIEESQQLQQEVRRSIHQQLEMQRTLQMLIEQQREQLKMMLDQQKERNKVGKKLNNP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00971 285 Gene3D - 142 199 - -
Adu06g00971 285 MobiDBLite consensus disorder prediction 122 143 - -
Adu06g00971 285 Coils Coil 255 275 - -
Adu06g00971 285 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 43 281 - -
Adu06g00971 285 SUPERFAMILY Homeodomain-like 142 198 IPR009057 -
Adu06g00971 285 Coils Coil 219 239 - -
Adu06g00971 285 Pfam Myb-like DNA-binding domain 147 196 IPR001005 -
Adu06g00971 285 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 143 197 IPR006447 GO:0003677
Adu06g00971 285 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 43 281 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00971 Adu-Chr6 12069055 12071155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00971 135 272 G2-like Transcription Factor Family AT4G28610 44.286 2.05e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu06g00971 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00971 - - aip:107647908 508.834