Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00969 ATGTCCCATTTCCGGAAACTCCAATTAACATACTTCATCTCCAAAATATCCCACACTTGCCTTAAACCCTCGCAAAGTCCTAGATTCCACAGCGCCAAATCTGCTCCCCAATCCGCACTAAAAAACTGTGATTTCAAGTTCCCCTCGAAGGTCAGAAAGGAAGCACAAGTCGCATTGCTCGAGTACCTTCACTCCACAAGGAGCTTGCAGTTCCTTGATGCAGACAACATGTGCAAAAACTCGCCCTTTTTCCTCAACGATATTCTGAGCAAGGTTCTTCAGAAGAAGAAGATCGACACTGCTGCCAGTGACGTCAAGAAATCAATCTCGCGTTACCTCCGTTACCACCCAATTAACGAGTTCGAACCATTCTTCGAGAGTACAGGTTTGAAGCCTTTTGAATACTTGCACCTTCTTCCAAGGAACATGATGTTCATCAACGATGACACTGTGTTGATGGAGAATTATCATACTCTGTGTAACTATGGTGTTCCCAGGAACAAAATGGGAAAGATCTTCAAGGATGCACCTCAAGTTTTTCGATATGAAAGTGGGGTACTGGTGTCCAAGTTTCAGAGTTATGAAGAGCTTGGTGTGGCTTCTTCAACTTTGGTAAAGGTGATTTCTTTGAGCCCTAGAATTTTGGTTGGAGATGTTGACCTTTATCTTGTGAAGGTTTTGGAGAAATTGAATCGTCTTGTTGGTGAAGAAAAGGGTAGTACTTGGATTGAGGAGCAGTTGTTGGATGAGAGTAGTTGTAATTTTGGGGTTATGCATGAGCTCTTGTGCTTGCTTGAGAAAGTTTACAGTGACAAAAAGTTGTTGGGTGAGATGATTGGCCAGCACCCTTTTGTTTGTTTTGAGGATTCTGGAGTTTGGGCATTGTCCCTCATTGTGTTCTTGGTGAAATTAGGGTTGTCCTTGGACCAAATAGCTATAATTTTTGTCAAGTTTCCGCAAATTGGGGTGTTGATGTTTCTGTCGAATTTGCGCAAATGTTTTACGTTCCTGTCTGATATCGATATGCATGCTGCGGAGATTGGGAATATTTTCCAGTCTCATTCCTTGCTGATGGGTTCATTCACTATTAAGAAATCTAGTAGTTTGCTCAGTAGCTTGAATGTTGGCAAGAAAAGGGTCTGTAAGTTAGTGCAGGATAATCCGGAAGGGATGCAGAATTGGGCTGTGGGGAGGAAAATTCAGCCTTACCCTGAGGATAAGGAAATGAGGGCTCTGAAAACAGAGTTCTTGAAAACAAAGTTCTTGTTGAGCCTTGGATACGAAGAGAACTCGGAGGGAATAAAACAGGCTTTTAAGCTGTTTAGAGGTAAGGGAGATGAGCTTCAGGAGAGATACGATTTTATTGTTAATGCTGGCTTGGACGCTAAGGATGTTCACGAAATGATTAAGGCTTCACCTCAGATTCTTAATCAGACCACAGATATGATCAACACGAAAATTGAGTATCTTGTGAATGAAGGATATCCTATATCAAGTTTAGTCGATTTCCCATCTTTTCTTTCCTATACACTTTGTAGAGTTAAGCTTAGGTTATCAATGTATAATTGGCTGAGAGACCATAGAGTTGTTCACCCCAGGCTTGCTTTGAGCACCATAGTTGCATGCTCAGAGGAGTTATTCTTACGGTTGTATGTAAATCGGCATCCATCTGGCCTTCAAGTTTGGCAGGATTTGAAGTCCGAAATTTATCCTGAGAATAATAACATGATATGA 1734 0.417 MSHFRKLQLTYFISKISHTCLKPSQSPRFHSAKSAPQSALKNCDFKFPSKVRKEAQVALLEYLHSTRSLQFLDADNMCKNSPFFLNDILSKVLQKKKIDTAASDVKKSISRYLRYHPINEFEPFFESTGLKPFEYLHLLPRNMMFINDDTVLMENYHTLCNYGVPRNKMGKIFKDAPQVFRYESGVLVSKFQSYEELGVASSTLVKVISLSPRILVGDVDLYLVKVLEKLNRLVGEEKGSTWIEEQLLDESSCNFGVMHELLCLLEKVYSDKKLLGEMIGQHPFVCFEDSGVWALSLIVFLVKLGLSLDQIAIIFVKFPQIGVLMFLSNLRKCFTFLSDIDMHAAEIGNIFQSHSLLMGSFTIKKSSSLLSSLNVGKKRVCKLVQDNPEGMQNWAVGRKIQPYPEDKEMRALKTEFLKTKFLLSLGYEENSEGIKQAFKLFRGKGDELQERYDFIVNAGLDAKDVHEMIKASPQILNQTTDMINTKIEYLVNEGYPISSLVDFPSFLSYTLCRVKLRLSMYNWLRDHRVVHPRLALSTIVACSEELFLRLYVNRHPSGLQVWQDLKSEIYPENNNMI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00969 577 PANTHER CGI-12 PROTEIN-RELATED 43 567 IPR003690 GO:0003690|GO:0006355
Adu06g00969 577 SMART mt_12 466 496 IPR003690 GO:0003690|GO:0006355
Adu06g00969 577 SMART mt_12 170 200 IPR003690 GO:0003690|GO:0006355
Adu06g00969 577 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Adu06g00969 577 Gene3D Transcription termination factor 3, mitochondrial 84 290 IPR038538 -
Adu06g00969 577 Gene3D Transcription termination factor 3, mitochondrial 292 565 IPR038538 -
Adu06g00969 577 Pfam mTERF 264 401 IPR003690 GO:0003690|GO:0006355
Adu06g00969 577 Pfam mTERF 413 547 IPR003690 GO:0003690|GO:0006355
Adu06g00969 577 Pfam mTERF 159 388 IPR003690 GO:0003690|GO:0006355
Adu06g00969 577 PANTHER MITOCHODRIAL TRANSCRIPTION TERMINATION FACTOR-RELATED 43 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00969 Adu-Chr6 12048786 12051610 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu06g00969 mTERF 5.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00969 - - lja:Lj1g3v4317450.1 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00969 06 12048786 12051610 Adu06g00969 06 12048786 12051610 ECH