Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00967 ATGCACTCCAAATCCCCCACTGTCACTGTTTCTGGTCTCCAACAAAGGTTTTGCCAACAGTGTAGCAGATTTCATCAGCTTCCTGAATTTGATCAAGGGAAACGAAGTTGCCGCAGGCGGCTTGCCGGCCATAACGAACGTCGGAGAAAGCCCCCACCATCCAGCAACTTCTTAACCTCTCGTTATGCAAGACTTTCTTCGTCACTTTTCGATGATAGTGGCAAAGGTGGAAGCTTCCTGATGGAATTCGCTTCATACCCGAAGCTGGGTCTTAGAAACACAGTTCCAAATCCCAGATCATCTCAACCAAGCTGGCAGGGCTATTCAGAGACATCATCTGACCTTTTCTTGCAAGGTTCAGTGGGTGGGACAAGCATCCCCAATCTCAGACACCCTCCTCCTTTGAGCGAAAGTTATGCCGGCGTAGCAGACTCAAGCTGTGCTCTCTCTCTTCTGTCAAGCCAAACATGGGGATCTAGTAACATGGCACCAAGTCTCGGGTTGAATAACATGTTGAATTTCAGTGGTGCACCTGTGACACAACTTGCTGCATCATCCCATGGTGAATCCATCCATCAAGTTCCGAATCCCTGGTGGTGTTCAAACAAGGTTGTCCCTGATCTAGGCCTCGGTCAATTCTCGCAGCTTCCTAATAGCCAAGTTCCCGGCGAGTTCGATGCACTGGAACCAGGTAGGAGGCATCATGTGAATCTAGAGTAG 720 0.4931 MHSKSPTVTVSGLQQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPSSNFLTSRYARLSSSLFDDSGKGGSFLMEFASYPKLGLRNTVPNPRSSQPSWQGYSETSSDLFLQGSVGGTSIPNLRHPPPLSESYAGVADSSCALSLLSSQTWGSSNMAPSLGLNNMLNFSGAPVTQLAASSHGESIHQVPNPWWCSNKVVPDLGLGQFSQLPNSQVPGEFDALEPGRRHHVNLE 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00967 239 Pfam SBP domain 1 50 IPR004333 GO:0003677
Adu06g00967 239 Gene3D - 1 38 IPR036893 GO:0003677|GO:0005634
Adu06g00967 239 SUPERFAMILY SBT domain 1 55 IPR036893 GO:0003677|GO:0005634
Adu06g00967 239 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 1 239 IPR044817 GO:0003677
Adu06g00967 239 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 17 1 239 - -
Adu06g00967 239 ProSiteProfiles Zinc finger SBP-type profile. 1 51 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00967 Adu-Chr6 12037194 12039815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00967 1 226 SBP-box Gene Family AT2G42200 42.529 5.96e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Adu06g00967 SBP 1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00967 - - ahf:112696101 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00967 06 12037194 12039815 Adu06g00967 06 12037194 12039815 ECH