Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00959 ATGAGGCCTCATACGCTCAACATTTTCCCCTCTCAGCCTATGCACGTTCACCCATCATCATCCAATTCCAAGGCAAGTATGGATAACCGCAAGGGTCCGACCTCAAGTTCTGAACAAGAAGGACCCAAAACACCAGACCCCAAGACACTGAGACGACTTGCTCAGAATAGAGAGGCAGCTCGCAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAGCAGCTAGAATCCAGTAGGATTAGGCTTAATCAGATTGAGCAAGAGCTACAGCGTGCTAGATCTCAAGGCATATTCTTCGGTGGAAGTGGAGTTATGGGTGGAGAACAAGGTCTTGGTGTGGGTATTAATGGCATAAGCACAGAGGCTGCAATGTTTGACGTAGAATATGCTAGATGGCTAGAGGAGCACCACCGCCTAGTGTGCGAGCTGAGGGCGGCGGTGCAAGAACACCTACCTGAGAACGAGCTCAGACTCTTTGTGGACAATTGCTTGGCGCATTACGACCAAGTTATGAACCTCAAGGGTTTAGTGGCCAGATCCGACGTCTTCCACCTTGTTTCCGGCATGTGGAAGACGCCGGCTGAGCGTTGCTTTATGTGGATCGGTGGATTCAGGCCCTCAGAACTCATTAAGATTATGGTGAGTCAAATAGAGCCTCTGACGGAGCAACAAATACTTGGGATATGTGGGTTGCAACAATCAACACAAGAGGCAGAAGAGGCTCTTTCCCAAGGCCTTGAGGCTCTCAATCAATCTCTCCTGAACACTATCACATCAGATTCTTTGAGCTCTCCTCCTGTTATGGCTACCTACATGGGACAGATGGCTCTCGCCATGAACAAGCTCGCTACTCTTGAAGATTTCGTCAAACAGGCAGATAATCTACGGCAGCAAACGGTGCACCGGCTGCATGAGATCCTAACGACGCGGCAGGCAGCGAGGTGTTTTCTGGCGATAGCGGAGTACTTCCATCGCCTGAGAGCCCTCAGTTCTCTCTGGTT 998 0.5 MRPHTLNIFPSQPMHVHPSSSNSKASMDNRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQIEQELQRARSQGIFFGGSGVMGGEQGLGVGINGISTEAAMFDVEYARWLEEHHRLVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKGLVARSDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIMVSQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNQSLLNTITSDSLSSPPVMATYMGQMALAMNKLATLEDFVKQADNLRQQTVHRLHEILTTRQAARCFLAIAEYFHRLRALSSLW 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00959 332 MobiDBLite consensus disorder prediction 12 43 - -
Adu06g00959 332 Pfam Seed dormancy control 139 213 IPR025422 GO:0006351|GO:0043565
Adu06g00959 332 Coils Coil 67 94 - -
Adu06g00959 332 MobiDBLite consensus disorder prediction 1 50 - -
Adu06g00959 332 ProSiteProfiles DOG1 domain profile. 121 332 IPR025422 GO:0006351|GO:0043565
Adu06g00959 332 CDD bZIP_HBP1b-like 48 100 - -
Adu06g00959 332 Pfam bZIP transcription factor 48 76 IPR004827 GO:0003700|GO:0006355
Adu06g00959 332 PANTHER TRANSCRIPTION FACTOR TGA9 29 332 - -
Adu06g00959 332 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 29 332 - -
Adu06g00959 332 Gene3D - 47 95 - -
Adu06g00959 332 SUPERFAMILY Leucine zipper domain 48 90 IPR046347 GO:0003700|GO:0006355
Adu06g00959 332 SMART brlzneu 44 130 IPR004827 GO:0003700|GO:0006355
Adu06g00959 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 46 90 IPR004827 GO:0003700|GO:0006355
Adu06g00959 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 51 66 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00959 Adu-Chr6 11929951 11939502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00959 1 332 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.857 3.41e-165 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Adu06g00959 DOG1 3.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00959 K14431 - gmx:100815176 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00959 06 11929951 11939502 Adu02g01598 02 67952193 67963067 PCT