Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu06g00947 | ATGGATTCCAGTTCCCGTTATCACCAACAGCAGCTAAACTCATCGTCGTCATCAGCATCAGGATTGCTTCGATTTCGCTCTGCTCCTCCTTCAGTCCTCGAACAGTTACAGGTTGTTGAAGGTTCTTGTTCATCTGAACAGGAGAGGTCGTCGTCGTCGTCGTTCTTGAGATTCTTCAGTTCCAACAAAAATAAGCCTTCTTCAACAACAAAACCGCCATCACTTTCTTTGATGAATTCGAATCATCGCTTCACCAGACTGCACAACTCGTCAACTGCACCTTCCGCTTCCACTTCCTCTGGAACGGATCTACCAAGGCAGAGCACTTTTCCAGCTTCGCATTTCTCCTTCCACGATAATAACGGGTATGATACTAATGCAAATACTATGACGAAAGGTGTTGGAAACTACAGCGGCAGTGATGAACTTAGTCTATCCACAATGAACAGATTCAATAACCAAATTAGCTTCTCATCATCAAGAAGCCCTTCTTCTTCAGCAACAGCAACTAATAGTAACCGTAATGGTGGATTATTCTTCCCTAATTATGGTTCTTGGAATGAGACATCATACAAGAGGGACGACCGAAATAGGATTCATAAGTTAATTTTTGATGCTAATCAGAATGAAGAGTTTGGGAATAATAAAGTAGTTGATACACTATCGCATCAACTAAGTTTTCCAAAAGCGGAACCGGAGATGTTTGCAATGGAGAATATGATTCACTTCCCATTATCAGATTCTGTTCCATGTAAAATTAGAGCCAAAAGAGGATGTGCTACTCATCCCAGAAGCATTGCCGAAAGGGTGAGAAGGACTCGGATCAGTGAACGAATGAAAAAATTACAAGAGCTTGTTCCGAACATGGACAAGCAAGCCAGCACAGCAGACATGTTGGACATGGCTGTAGGATACATAAAAGATCTTCAGAAACAATTTAAGAATCTAAGTGACAGACGGGCTAAATGCAAGTGTATAAGGATGCAGAAATCAGATTCTTCAAAAAAATTTTGA | 1014 | 0.4122 | MDSSSRYHQQQLNSSSSSASGLLRFRSAPPSVLEQLQVVEGSCSSEQERSSSSSFLRFFSSNKNKPSSTTKPPSLSLMNSNHRFTRLHNSSTAPSASTSSGTDLPRQSTFPASHFSFHDNNGYDTNANTMTKGVGNYSGSDELSLSTMNRFNNQISFSSSRSPSSSATATNSNRNGGLFFPNYGSWNETSYKRDDRNRIHKLIFDANQNEEFGNNKVVDTLSHQLSFPKAEPEMFAMENMIHFPLSDSVPCKIRAKRGCATHPRSIAERVRRTRISERMKKLQELVPNMDKQASTADMLDMAVGYIKDLQKQFKNLSDRRAKCKCIRMQKSDSSKKF | 337 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu06g00947 | 337 | Gene3D | - | 260 | 332 | IPR036638 | GO:0046983 | |
Adu06g00947 | 337 | MobiDBLite | consensus disorder prediction | 54 | 117 | - | - | |
Adu06g00947 | 337 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 24 | 329 | - | - | |
Adu06g00947 | 337 | PANTHER | TRANSCRIPTION FACTOR BHLH130 | 24 | 329 | - | - | |
Adu06g00947 | 337 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 259 | 309 | IPR011598 | GO:0046983 | |
Adu06g00947 | 337 | Pfam | Helix-loop-helix DNA-binding domain | 264 | 310 | IPR011598 | GO:0046983 | |
Adu06g00947 | 337 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 262 | 325 | IPR036638 | GO:0046983 | |
Adu06g00947 | 337 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Adu06g00947 | 337 | SMART | finulus | 265 | 315 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu06g00947 | Adu-Chr6 | 11739673 | 11743472 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu06g00947 | 18 | 314 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT2G42280 | 40.115 | 6.98e-49 | 166 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Adu06g00947 | HLH | 3.7e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu06g00947 | - | - | ahf:112758816 | 564.688 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu06g00947 | 06 | 11739673 | 11743472 | Adu06g00947 | 06 | 11739673 | 11743472 | ECH | |
Adu06g00947 | 06 | 11739673 | 11743472 | Adu09g03015 | 09 | 117770204 | 117779241 | ECH | |
Adu06g00947 | 06 | 11739673 | 11743472 | Adu02g01573 | 02 | 67106359 | 67109529 | PCT |