Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00915 ATGATCCAGATGATACACTTCTCCCAGGACAGTATCTATCTTGTGATAAATCGCTTCGTGCTGCCACTAATGCTTCGCTGGGAAAGTAATATTCCCTACTGGATAAGCGAAAGCCCCTCCACTTCGAATCTCACTGCATATCTGACAAACAATGGAGCTCTACAACTTTTAGACAACAGTTCTAATGTTGTTTGGAGTGTGTTTGGGGAAGACCACAATGAATCTGTGAACTACCGATTTCTTAGGATAGATGTCGATGGCAATCTCCGCCTATATTCATGGGTGGAGGCTTCACAGTCATGGAGATCTGTCTGGCAAGCTGTTGAGAATCAGTGCAAGGTTTTTGCAACTTGTGGTAAACAAGGGGTCTGTGTTTTGTCTCCCTCAGGTACTGCTGATTGTGTGTGCCCTTTCGAGCAGACTGACACCGGGACCTGTTTGGTTCCATATGAACAGAAGTGTGAACCTGGCTCCACTATGATGACATATTGGAACACACACCTATATGGAATTTACCCTGTTGATGGTCCGGGTATCATAAGTAGCCTGCATCAATGTATGCAATTGTGCCAGAATGATTCAAGGTGTACGGTCGCAACCTTTTCTAATGATGGTGTTCCCCAATGCTCAATAAAGAAATCTGAATATGTCACTGGTTATTCAGATCCGTCTCTAAGCTCGGTATCATTTGTTAAGAGATGTTCATTTCCATTTGCAGTAAATCCCACACTTGGAAGCACACCTCCAACCAAACAAGCTCCTAGATTTTGTGTTCCTTGTTTAGTAGGAGCAGCCTCAGGCACATGTTTCGTTGTTGTTATCATTCAGCTTGGAATTGTTTTCTACATCTATAGAAGAAAAATTTCTACTAGGAGGAAAGAAAGTTTAGCTTCCGCAGGTGCAAATTCAAAGGGCTTAGTTGCATTATCTTTTTCAGAGATCAAGAGCCTCACCGAAGACTTCAAGGATCAGATTGGACCAAATATGTTCAAGGGCATGCTACCAAACAAATCTCTTGTTGCAGTTAAAGAGCTGAATGCACCCATAGATGACAGGAAGTTTCGGAGTGCTGTTCTGAAGATTGGAAGCATCCACCACAGGAATCTTGTGAAGCTGGAGGGCTATTGTTGTGAGTTCAATCATAGATTCTTAGTCTACGAGTACGTCAAAAACGGTTCTCTTGAGAACTATATAGACGATTCCCCTCTTTGCAAGAAACTGACTTGGAGAAAGAGAGTTGACATCTGCTCACGTGTGGCCAAGGCCATCAATTATCTTCACTCTGAATGCAGGGAGTTTATAAGTCATGGAAATCTGAAGTGTGAAAATGTCATGTTGGATGAGAACTTAGAAGCCAAGGTGAGTGAATTTGGGTTCGCAATAGTAGACGGCGAGGCTGTGTACTCTGGCTTTTCGGCCGAGAGGGACATAGCAGATTTTGGCATGTTAGTCCTAACCTTGTTGACCGGATGTAGAGATCAGACAGAACTTTGTGAGTGGTCATATAAAGAATGGATAGAAGGGAATGCTGCAAATGTCATTGATAAAAGAATTGAAGGTGGTGCCAACTCAAATGAACTTGAACGGGTGTTGAGAATTGCATTCTGGTGCTTACAAAGCGATGAACGTCAAAGACCCTCAATGTTGGAGGTAGTGAGAGTATTAGATGGAACATTGAGTGTTGATCCAGCACCACCTCCATTTTCTGGCCACAGACCATTGCTGGAAGAATCTGAGACACAAGAAGATGATGTTTCAGAATCTGACATTCAGTAG 1776 0.4296 MIQMIHFSQDSIYLVINRFVLPLMLRWESNIPYWISESPSTSNLTAYLTNNGALQLLDNSSNVVWSVFGEDHNESVNYRFLRIDVDGNLRLYSWVEASQSWRSVWQAVENQCKVFATCGKQGVCVLSPSGTADCVCPFEQTDTGTCLVPYEQKCEPGSTMMTYWNTHLYGIYPVDGPGIISSLHQCMQLCQNDSRCTVATFSNDGVPQCSIKKSEYVTGYSDPSLSSVSFVKRCSFPFAVNPTLGSTPPTKQAPRFCVPCLVGAASGTCFVVVIIQLGIVFYIYRRKISTRRKESLASAGANSKGLVALSFSEIKSLTEDFKDQIGPNMFKGMLPNKSLVAVKELNAPIDDRKFRSAVLKIGSIHHRNLVKLEGYCCEFNHRFLVYEYVKNGSLENYIDDSPLCKKLTWRKRVDICSRVAKAINYLHSECREFISHGNLKCENVMLDENLEAKVSEFGFAIVDGEAVYSGFSAERDIADFGMLVLTLLTGCRDQTELCEWSYKEWIEGNAANVIDKRIEGGANSNELERVLRIAFWCLQSDERQRPSMLEVVRVLDGTLSVDPAPPPFSGHRPLLEESETQEDDVSESDIQ 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00915 591 Gene3D Phosphorylase Kinase; domain 1 283 388 - -
Adu06g00915 591 Gene3D Hepatocyte Growth Factor 168 236 - -
Adu06g00915 591 ProSiteProfiles Bulb-type lectin domain profile. 1 104 IPR001480 -
Adu06g00915 591 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 20 585 - -
Adu06g00915 591 PANTHER OS07G0415500 PROTEIN 20 585 - -
Adu06g00915 591 ProSiteProfiles PAN/Apple domain profile. 154 234 IPR003609 -
Adu06g00915 591 ProSiteProfiles Protein kinase domain profile. 293 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00915 591 SUPERFAMILY alpha-D-mannose-specific plant lectins 23 103 IPR036426 -
Adu06g00915 591 MobiDBLite consensus disorder prediction 562 591 - -
Adu06g00915 591 Pfam PAN domain 180 223 IPR003609 -
Adu06g00915 591 Pfam Protein tyrosine and serine/threonine kinase 336 460 IPR001245 GO:0004672|GO:0006468
Adu06g00915 591 SUPERFAMILY Protein kinase-like (PK-like) 330 555 IPR011009 -
Adu06g00915 591 Gene3D - 13 128 - -
Adu06g00915 591 Pfam S-locus glycoprotein domain 73 139 IPR000858 GO:0048544
Adu06g00915 591 Gene3D Transferase(Phosphotransferase) domain 1 389 465 - -
Adu06g00915 591 Gene3D Transferase(Phosphotransferase) domain 1 466 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00915 Adu-Chr6 11196818 11200601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00915 201 565 Receptor kinase-like Gene Family AT4G05200 25.943 1.01e-41 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Adu06g00915 PK_Tyr_Ser-Thr 1.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00915 - - gmx:100809478 837.41