Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00909 ATGGGTAACTGCTGCGGGACGCCGTCGACTCTCCACGATGGAGAAAAGGCCAACAAAGGGAAGAAGAAGAAGGAGAAGCAGAACCCCTTCGCAGTTGACTACGGGAACGGAAACGACGTCGTTCGTGGCTCGAAGCTCGTCGTTTTGAAGGACCCAACGGGTCGCGAGATCTCGCAGCGTTACGAGCTAGGTGGCGAGCTGGGTCGTGGTGAGTTCGGAGTCACGTACCTTTGTACGGACAAGGAGACTCGCGTGGACTACGCGTGCAAATCGATCTCGAAGAAGAAGCTGAGAACCGCCATAGACATCGAGGATGTGAGGAGAGAGGTTGAAATCATGAGGCACCTTCCCAAGCACCCTAACATCGTTTCTTTGAAGGATACTTTCGAAGATGATAGTGCGGTGCATCTTGTTATGGAGCTCTGTGAGGGTGGTGAGTTGTTTGACCGTATCGTTGCCAGGGGGCATTACACGGAGAGAGCCGCTGCGGCTGTTACCAAAACCATCGTTGAAGTTGTGCAGATGTGCCACAAACATGGTGTGATGCACCGGGATCTCAAACCCGAGAACTTTCTGTTTGCAAATAAGAAGGAAACAGCAGCTCTCAAGGCTATTGATTTTGGATTGTCGGTCTTCTTTAAACCAGGGGAAAGATTTAATGAGATTGTTGGAAGTCCATATTACATGGCTCCTGAAGTACTAAAGAGAAATTATGGCCCAGAAGTAGATATTTGGAGTGCTGGAGTAATTCTATACATCTTACTTTGTGGTGTCCCGCCATTTTGGGCAGAAACTGAACAAGGAGTTGCACAGGCAATTATACGATCTGTGGTTGATTTTAAAAGGGAACCGTGGCCAAAAGTTTCTGATAATGCGAAAGACCTTGTGAAGAAGATGCTTGATCCTGACCCTAAGCGTCGCCTTACTGCACAAGAAGTGTTAGATCATCCATGGTTGCAAAATGCAAAGAAGGCCCCTAATGTTTCATTAGGAGAAACTGTCAAAGCAAGGCTCATGCAATTTTCTGTAATGAACAAGCTTAAGAAGAGAGCTTTGAGGGTGATTGCAGAGCATTTGTCTGTAGAAGAAGCGGCTGGAATAAAAGAGGGATTCCAGCTCATGGATACAAGCAATAGAGGCAAAATTAACATCGATGAACTACGAGTAGGGTTGCAAAAACTAGGCCATCAAGTTCCAGAGTCAGATCTCCAAATTCTTATGGAAGCTGGTGATGTAGATAAGGATGGGTACCTAGATTATGGAGAGTTTGTAGCCATTTCTGTTCATCTGAGAAAGATGGGAAATGACGAGCACCTTCGCAAAGCCTTCCAGTTTTTCGATCAGAACCAAAACGGATATATTGAAATGGAGGAGCTGCGCAGCGCCTTGCATGATGAGGTCGACGCAAACAGCGAAGATGTCATAAGTGCAATTATGCATGATGTGGACACAGATAAGGATGGAAGAATAAGTTATGAGGAATTCGCCACGATGATGAAGGCCGGCACAGATTGGAGAAAAGCATCGAGACAGTATTCGCGAGAGAGATTCACCAGTCTCAGTCTCAAATTGATGAAGGATGGCTCATTGTCGTTAAACAATGAGGGTCATAGATGA 1617 0.4626 MGNCCGTPSTLHDGEKANKGKKKKEKQNPFAVDYGNGNDVVRGSKLVVLKDPTGREISQRYELGGELGRGEFGVTYLCTDKETRVDYACKSISKKKLRTAIDIEDVRREVEIMRHLPKHPNIVSLKDTFEDDSAVHLVMELCEGGELFDRIVARGHYTERAAAAVTKTIVEVVQMCHKHGVMHRDLKPENFLFANKKETAALKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFKREPWPKVSDNAKDLVKKMLDPDPKRRLTAQEVLDHPWLQNAKKAPNVSLGETVKARLMQFSVMNKLKKRALRVIAEHLSVEEAAGIKEGFQLMDTSNRGKINIDELRVGLQKLGHQVPESDLQILMEAGDVDKDGYLDYGEFVAISVHLRKMGNDEHLRKAFQFFDQNQNGYIEMEELRSALHDEVDANSEDVISAIMHDVDTDKDGRISYEEFATMMKAGTDWRKASRQYSRERFTSLSLKLMKDGSLSLNNEGHR 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00909 538 Gene3D Transferase(Phosphotransferase) domain 1 147 327 - -
Adu06g00909 538 CDD STKc_CAMK 60 318 - -
Adu06g00909 538 ProSitePatterns EF-hand calcium-binding domain. 447 459 IPR018247 -
Adu06g00909 538 Pfam Protein kinase domain 61 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00909 538 Gene3D Phosphorylase Kinase; domain 1 64 146 - -
Adu06g00909 538 ProSiteProfiles EF-hand calcium-binding domain profile. 362 397 IPR002048 GO:0005509
Adu06g00909 538 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 16 516 - -
Adu06g00909 538 SMART efh_1 402 430 IPR002048 GO:0005509
Adu06g00909 538 SMART efh_1 474 502 IPR002048 GO:0005509
Adu06g00909 538 SMART efh_1 438 466 IPR002048 GO:0005509
Adu06g00909 538 SMART efh_1 366 394 IPR002048 GO:0005509
Adu06g00909 538 ProSiteProfiles EF-hand calcium-binding domain profile. 434 469 IPR002048 GO:0005509
Adu06g00909 538 SUPERFAMILY EF-hand 348 526 IPR011992 -
Adu06g00909 538 ProSitePatterns EF-hand calcium-binding domain. 483 495 IPR018247 -
Adu06g00909 538 ProSiteProfiles EF-hand calcium-binding domain profile. 398 433 IPR002048 GO:0005509
Adu06g00909 538 ProSiteProfiles EF-hand calcium-binding domain profile. 470 505 IPR002048 GO:0005509
Adu06g00909 538 MobiDBLite consensus disorder prediction 1 26 - -
Adu06g00909 538 SUPERFAMILY Protein kinase-like (PK-like) 46 336 IPR011009 -
Adu06g00909 538 SMART serkin_6 61 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00909 538 ProSiteProfiles Protein kinase domain profile. 61 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00909 538 Gene3D - 328 502 - -
Adu06g00909 538 CDD EFh 438 500 IPR002048 GO:0005509
Adu06g00909 538 ProSitePatterns Protein kinases ATP-binding region signature. 67 90 IPR017441 GO:0005524
Adu06g00909 538 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 516 - -
Adu06g00909 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Adu06g00909 538 ProSitePatterns EF-hand calcium-binding domain. 411 423 IPR018247 -
Adu06g00909 538 Pfam EF-hand domain pair 437 500 IPR002048 GO:0005509
Adu06g00909 538 Pfam EF-hand domain pair 367 426 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00909 Adu-Chr6 11097842 11101486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00909 1 535 EF-hand Containing Proteins AT5G19450 78.731 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Adu06g00909 Pkinase 7.9e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00909 K13412 - gmx:100790745 936.021