Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00880 ATGCATAGCAACTTCTCTAGCTTCGTCCGCCAGCTCAATACCTATGGTTTTCGTAAAGTTGCAACAAGCAGATGGGAATTCTCCAATGAGAAGTTCAAGAAAGGTGAAAGAGAAATGCTATGTGAAATTCGAAGAAGAAGAGCATGGACAAGCAAGCAACGGAATGCAGCAGCAAACCAAGGTGCACCCCAAGACTCCGATGAAGATCAAAGGTCTTCATCGACTTCTTCGTCTTCGGGTTACACCACTCTAGTTGATGAGAACAAGCGCCTCAAGAAGGAGAATGGGGTGGGTGGCGAAATACTCGCATGCTCAGGAGGAGGAAGAGGACGAGGACGAGAATGA 345 0.4725 MHSNFSSFVRQLNTYGFRKVATSRWEFSNEKFKKGEREMLCEIRRRRAWTSKQRNAAANQGAPQDSDEDQRSSSTSSSSGYTTLVDENKRLKKENGVGGEILACSGGGRGRGRE 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00880 114 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-3 2 97 - -
Adu06g00880 114 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 2 97 IPR027725 -
Adu06g00880 114 SUPERFAMILY "Winged helix" DNA-binding domain 2 46 IPR036390 -
Adu06g00880 114 MobiDBLite consensus disorder prediction 52 85 - -
Adu06g00880 114 Gene3D - 1 47 IPR036388 -
Adu06g00880 114 SMART hsfneu3 2 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g00880 114 Pfam HSF-type DNA-binding 2 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu06g00880 114 MobiDBLite consensus disorder prediction 49 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00880 Adu-Chr6 10776042 10780226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00880 2 107 HSF AT2G41690 53.333 1.89e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Adu06g00880 HSF_DNA-bind 4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00880 K09419 - gmx:100786140 142.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00880 06 10776042 10780226 Adu06g00880 06 10776042 10780226 ECH