Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00878 ATGGAGTTGCATGATGGTGGTGCAATCATGGAGAGTGATAATAATATTAGAGAAGTGTGCTTGGTTTGGGAGAATTTGGAAGTGGAAGTAGTAAGCAGTTATAGTAGTGAAAGAAGGAAGAAAGTGTTAAATGGAATAAGTGGATATGCTGAACCAAACAGAATCATGGCTCTAATTGGTCCTTCTGGTGCTGGCAAATCCACTTTCCTTGATGCTCTTGCTGGAAGGCTTGGCGGCAATGTTAGAATCACTGGAAATGTAACACTGAATGGGACTAAGACAATTACAAGCTGCAAAAACATTAATTATGTAACTCAAGAAGACTATTTCCTGGGAACTCTAACAGTGAGGGAAACACTAACATATGCTGCTCATCTGAGACTTGCTGCAAACAAGAGCAAAGATGAGATTGACAAGGTTGTAGTCAAGACGCTCGATGAAATGGGTCTTAAAGAATGTGCAGAGAGCAGGCTTGGGAATTGGCATTCAAGAGGAATAAGTAAAGGAGAGAAGAGAAGACTCAGCATTGGCATTGAAATCTTAACTCAGCCTCATATACTGTTGCTTGATGAACCTACCAGTGGATTGGATAGTGCTGCTGCTTTCTTTGTCATTTCATCTCTCACAAGCATAGCACATAATGGAAGAATAGTATTATGCTCCATTCACCAACTTAGCAGTGAAGTCTTCAATCTCTTTGATGATTTGGTGCTCCTTGCAGCAGGTGAAACTGTCTATTTTGGAGAAAGAACTAATGCTATTAAGTTCTTTGCTGATGCAGGGTTTCCTTGTCCAACAAGAAAGAATCCTCCGGAGCACTTCCTTCGATGCGTTAGTCCAGAGTTTGATAATGTTCTAAGTCTAATGCGGTCCAAAAATGTCAATGATACCCCATCATCATGGAATTCTTTAGTGAATATGACTACAGAGGAGACCAAATGGAATCTGATAAACAGTTTCAAGAATTCCATGCATTCAGCAAATGTGAGAGAAAAAATCAGAGAAATCAAACTAAGAAAAGAACCTGTTATTGACAGAGCATATGATACTAGCACATTGAAGCAGCTATGTACTTTGACTCACAGATCATTCCTTAACATGACTAGAGACATCGGTTACTACTGGTTAAGGATCTTGTTCTACATCTTAGTATCAGTGTGTGCTGGTTTTCTTTATCTAAATGTAGGAACAAGTAATAATGCAATCTTGCCAAGAAGCAAGTGTGATGGATTCATCTATGGCTTTATGACCTTCCTTTGCATTGGTGGAATGCCCTTCTTCCTTGAGGAGTTAAAGGTGTTCGAAGGCGAAAGGTTCGGGAGGCATTATGGCGAGGCCATTTACGTGTTGTCGAGTTTCATGTCATCACTCCCTTTTGTTGTTGCCATTTCCCTGACTTCAGGAACAATACTTTACCACATGGTGAATTTTCACCCTGGATTCTCTCATTACTGCTACTTTTGCATAAACCTCTTCTGCAGCATTTCTGTCACAGAAGGCTCCATGCTTGTGGTTGCAGCACTAGTCTCCAACCAATTGCTAGCTATTGTAACTGCAGCTGGTGTAACTGTACTCATGTTGATGCCATCAAATGTATCCAGAAGGATAACAGACATTCCTAACTTCTTCTGGCGCTATCCAATGTCCTACATCAGTTATATTGCATGGTCCATAGAGGGTCAATACAAGAATGACTTCGTTGGACTTGAATTTGAACCACTGATACCTGGGGATAGGAAGATAAAAGGTGAGGTGATACTTAAGGAAATACTTGGGATCCAAACAGATTATTCAAAGTGGTGGGATGTTGGAGTTCTGGTTTTGTTGTTAATATCTTATAGAGTGCTCTTTTACTTGGCTCTTAAGCATAGGGAGAGAGCTTCATCAATATTTCGCACCAGAATGAGTGAATGA 1914 0.4033 MELHDGGAIMESDNNIREVCLVWENLEVEVVSSYSSERRKKVLNGISGYAEPNRIMALIGPSGAGKSTFLDALAGRLGGNVRITGNVTLNGTKTITSCKNINYVTQEDYFLGTLTVRETLTYAAHLRLAANKSKDEIDKVVVKTLDEMGLKECAESRLGNWHSRGISKGEKRRLSIGIEILTQPHILLLDEPTSGLDSAAAFFVISSLTSIAHNGRIVLCSIHQLSSEVFNLFDDLVLLAAGETVYFGERTNAIKFFADAGFPCPTRKNPPEHFLRCVSPEFDNVLSLMRSKNVNDTPSSWNSLVNMTTEETKWNLINSFKNSMHSANVREKIREIKLRKEPVIDRAYDTSTLKQLCTLTHRSFLNMTRDIGYYWLRILFYILVSVCAGFLYLNVGTSNNAILPRSKCDGFIYGFMTFLCIGGMPFFLEELKVFEGERFGRHYGEAIYVLSSFMSSLPFVVAISLTSGTILYHMVNFHPGFSHYCYFCINLFCSISVTEGSMLVVAALVSNQLLAIVTAAGVTVLMLMPSNVSRRITDIPNFFWRYPMSYISYIAWSIEGQYKNDFVGLEFEPLIPGDRKIKGEVILKEILGIQTDYSKWWDVGVLVLLLISYRVLFYLALKHRERASSIFRTRMSE 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00878 637 CDD ABCG_EPDR 21 248 - -
Adu06g00878 637 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 20 630 - -
Adu06g00878 637 Gene3D - 17 260 IPR027417 -
Adu06g00878 637 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 20 630 - -
Adu06g00878 637 SMART AAA_5 52 243 IPR003593 -
Adu06g00878 637 ProSitePatterns ABC transporters family signature. 166 180 IPR017871 GO:0005524
Adu06g00878 637 Pfam ABC transporter 43 194 IPR003439 GO:0005524
Adu06g00878 637 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 266 IPR003439 GO:0005524
Adu06g00878 637 Pfam ABC-2 type transporter 223 326 IPR043926 GO:0140359
Adu06g00878 637 Pfam ABC-2 type transporter 355 563 IPR013525 GO:0016020|GO:0140359
Adu06g00878 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 257 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00878 Adu-Chr6 10717750 10722391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00878 33 235 Calmodulin-binding Proteins AT2G36910 29.680 7.95e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00878 - K05681 aip:107646291 1062.37