Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00867 ATGAATATTGGTGGAGTTGAAGCTATTACAAGGAAACTTGCAGTCTCAGTGGATGAAGGTATCAGTGAAGAGAGTATAGATCCCAGACAAAAGGTTTATGGAGTCAACCGTTATACAGAGAAACCTTCTAGAAGCTTCCTGATGTTTGTGTGGGATGCACTGCAGGACTTAACTCTAATCATTCTTATAATTTGTGCTGTAGTTTCTATTGGTGTAGGGATCGCTACTGAAGGGTTTCCAAAAGGAACATATGATGGTGTAGGAATCATACTTAGTATTTTTTTGGTTGTCATTGTTACTGCTGTCAGTGACTACCAGCAATCCCTACAGTTCAGAGATTTAGACAAAGAGAAGAAGAAGATCTTTGTTCATGTCACCAGGGGTGGAAAAAGGCAGAAGATCTCAATATATGATATAGTAGTTGGTGATATTGTTCATTTGTCGACCGGAGATCAAGTTCCAGCCGATGGGCTGTATATATCAGGATACTTTTTACTTATAGATGAATCGAGTTTGTCAGGTGAGAGTGAACCTGTAAATGTGAATGAAGAAAAGCCTTTTCTTCTCTCAGGAACCAAAGTGCAGGATGGTCAGGGGAAGATGTTAGTTACAACAGTTGGTATGAAGACTGAATGGGGAAAATTGATGGAAACTCTAAATGAGGGTGGAGAGGATGAGACACCATTGCAGGTGAAATTGAATGGAGTTGCTACAATTATTGGTAAAATTGGTTTATCTTTTGCTTGCTTGACATTCGTGGTGTTGACAATCAGATTTCTTGCTGAGAAAGCAATTAATGGTGACATATCAAGTTGGTCTTCCAATGATGCATTGAAGCTACTGGACTTCTTTGCTATTGCTGTAACCATAATAGTGGTTGCGGTTCCTGAAGGATTACCATTGGCTGTGACACTCAGTCTTGCTTTCGCTATGAAAAAATTAATGAATGACAAGGCACTTGTGAGACACCTTTCTGCCTGTGAGACTATGGGTTCAAGTAGTTGCATTTGCACAGATAAGACAGGGACATTAACCACTAACCATATGGTAGTCAATAAAATATGGATATGCGAAAAAGCGACGCATATAAAAGGTAAAGAGAGTGCAGATGAACTGAAAACAACTATACCTGATGGAGTACAAAGCATTCTTTCTCAGGCTATATGTCAAAATACATCTGCTGAAGTAGTTAAGGATAAAGATGGAAATAACACAATATTGGGAACTCCAACAGAATCGGCATTGATGGAATTTGGCTTGCTTTTAGGTGCTGATTTTGATGAACAGCGTAGAGTGTATAAGATACTCAAGATTGAGCCTTTCAATTCAGTGAGGAAGAAGATGTCTGTGCTTGTGGCTCTTCCGGATGGAGGAGTCAGAGCTTTCTGCAAGGGTGCATCAGAGATAATATTAAAAATGTGCAACAAAATCATTGACCACAATGGAGAAGTTGTTGACCTTCCTGAAGACCAAGCAGATAATGTAACTGCTGTTATAAATGGCTTTGCCTCTGAAGCTTTGAGAACTCTTTGTTTGGCTGTCAAAGATATAAATGAAACCAAAGGGGATATCAATATCCCTGACAGTGGCTATACTCTGATAGCCATAGTAGGAATCAAGGATCCTGTACGCCCTGGGGTAAGGGAAGCAGTTCAAACTTGTTTAGCCGCCGGAGTAACTGTCCGGATGGTCACTGGTGATAACATTCACACGGCCAGAGCTATAGCTCAAGAATGTGGTATACTTACTGAGGGTGGTGTAGCAATTGAAGGACCAGAATTTCGTAACTTGTCTCCAGAGCAAATGAAGGATATTATACCAAGAATTCAGGTGATGGCACGATCCTTACCACTTGACAAGCATAAGTTAGTAACCAATTTGAGGAGTATGTTTGGTGAGGTTGTTGCTGTTACCGGCGATGGAACCAACGATGCTCCAGCATTGCATGAATCAGACATTGGACTTGCCATGGGCATAGCTGGAACAGAGGTTGCAAAAGAAAATGCTGATGTGATTATAATGGATGACAATTTCACCACCATTGTCAATGTTGCCAAATGGGGAAGAGCAGTGTACATAAACATTCAAAAATTTGTGCAGTTCCAGTTAACGGTTAACATTGTTGCTCTGGTTATCAACTTTGTTTCAGCATGCATCACAGGATCTGCACCACTCACAGCTGTGCAGTTGCTTTGGGTTAACTTGATTATGGACACATTGGGTGCATTAGCCCTTGCTACTGAACCTCCTAATGAAGGACTTATGAAAAGGCCCCCAGTTACAAGGGGAGCAAGCTTTATAACCAAAACCATGTGGAGGAATATCATTGGTCAAAGTATATATCAGTTAATTGTCCTTGGAATTCTAACCTTTGATGGGCTGAAGCTACTCAATATTAGTGGTCCAGATGCAACTAAAGTGCTCAACACCTTGATATTCAACTCCTTTGTATTTTGCCAGGTGTTCAATGAGATAAACAGCAGAGACATGGAAAAGATAAATGTATTCAGAGGCATGTTTCGGAGCTGGATATTCTTGGGGATAATTTTCGCGACGGCGGTGTTTCAAGTGATAATAGTTGAGTTCTTGGGAACTTTTGCCAGCACTGTCCCTCTAAACTGGCAAATGTGGTTACTCAGTATTGCAATTGGTGTAGTTAGCATGCCGCTTGCTGCTATAATCAAGTGCATTCCAATTGAAAGAGCTTCTGCTATTAAGCATCACCATGATGGATATGAGGCACTGCCTTCTGGTCCTGAACTAGCTTAA 2769 0.4081 MNIGGVEAITRKLAVSVDEGISEESIDPRQKVYGVNRYTEKPSRSFLMFVWDALQDLTLIILIICAVVSIGVGIATEGFPKGTYDGVGIILSIFLVVIVTAVSDYQQSLQFRDLDKEKKKIFVHVTRGGKRQKISIYDIVVGDIVHLSTGDQVPADGLYISGYFLLIDESSLSGESEPVNVNEEKPFLLSGTKVQDGQGKMLVTTVGMKTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIGLSFACLTFVVLTIRFLAEKAINGDISSWSSNDALKLLDFFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSSSCICTDKTGTLTTNHMVVNKIWICEKATHIKGKESADELKTTIPDGVQSILSQAICQNTSAEVVKDKDGNNTILGTPTESALMEFGLLLGADFDEQRRVYKILKIEPFNSVRKKMSVLVALPDGGVRAFCKGASEIILKMCNKIIDHNGEVVDLPEDQADNVTAVINGFASEALRTLCLAVKDINETKGDINIPDSGYTLIAIVGIKDPVRPGVREAVQTCLAAGVTVRMVTGDNIHTARAIAQECGILTEGGVAIEGPEFRNLSPEQMKDIIPRIQVMARSLPLDKHKLVTNLRSMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVAKWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNEGLMKRPPVTRGASFITKTMWRNIIGQSIYQLIVLGILTFDGLKLLNISGPDATKVLNTLIFNSFVFCQVFNEINSRDMEKINVFRGMFRSWIFLGIIFATAVFQVIIVEFLGTFASTVPLNWQMWLLSIAIGVVSMPLAAIIKCIPIERASAIKHHHDGYEALPSGPELA 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00867 922 Pfam Cation transport ATPase (P-type) 391 477 - -
Adu06g00867 922 PRINTS P-type cation-transporting ATPase superfamily signature 337 351 - -
Adu06g00867 922 PRINTS P-type cation-transporting ATPase superfamily signature 168 182 - -
Adu06g00867 922 PRINTS P-type cation-transporting ATPase superfamily signature 535 546 - -
Adu06g00867 922 PRINTS P-type cation-transporting ATPase superfamily signature 557 567 - -
Adu06g00867 922 PRINTS P-type cation-transporting ATPase superfamily signature 662 674 - -
Adu06g00867 922 PRINTS P-type cation-transporting ATPase superfamily signature 638 657 - -
Adu06g00867 922 SFLD p-type atpase 319 690 IPR044492 -
Adu06g00867 922 PANTHER CATION TRANSPORTING ATPASE 2 905 - -
Adu06g00867 922 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 2 900 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Adu06g00867 922 Pfam Cation transporting ATPase, C-terminus 723 896 IPR006068 -
Adu06g00867 922 Pfam E1-E2 ATPase 122 315 - -
Adu06g00867 922 PRINTS H+-transporting ATPase (proton pump) signature 495 513 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu06g00867 922 PRINTS H+-transporting ATPase (proton pump) signature 638 654 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu06g00867 922 PRINTS H+-transporting ATPase (proton pump) signature 670 695 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu06g00867 922 Pfam Cation transporter/ATPase, N-terminus 4 69 IPR004014 -
Adu06g00867 922 SMART Cation_ATPase_N_a_2 2 74 IPR004014 -
Adu06g00867 922 SUPERFAMILY HAD-like 336 743 IPR036412 -
Adu06g00867 922 SFLD Haloacid Dehalogenase 319 690 - -
Adu06g00867 922 Gene3D - 347 542 IPR023299 GO:0000166
Adu06g00867 922 ProSitePatterns E1-E2 ATPases phosphorylation site. 339 345 IPR018303 -
Adu06g00867 922 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 899 IPR023298 -
Adu06g00867 922 Gene3D - 52 897 - -
Adu06g00867 922 Gene3D - 334 683 IPR023214 -
Adu06g00867 922 SUPERFAMILY Calcium ATPase, transduction domain A 122 218 IPR008250 -
Adu06g00867 922 PANTHER CALCIUM-TRANSPORTING ATPASE 2 905 - -
Adu06g00867 922 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 603 726 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu06g00867 922 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 89 260 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu06g00867 922 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 275 399 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu06g00867 922 CDD P-type_ATPase_Ca_PMCA-like 29 771 - -
Adu06g00867 922 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 343 547 IPR023299 GO:0000166
Adu06g00867 922 Gene3D - 20 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00867 Adu-Chr6 10550579 10555125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00867 4 919 Primary Pumps ATPases AT2G41560 75.109 0.0 1431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00867 K01537 - gmx:100783489 1547.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00867 06 10550579 10555125 Adu06g00867 06 10550579 10555125 ECH